CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88840
EER94066
EES00126
EES03822
EES03891
EES05458
EES15518
KXG22202
KXG26729
KXG33215
KXG36152
KXG38626
OQU77594
OQU78555
OQU79263
OQU82692

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	EES00126	AT1G55190.1	21798944
AT2G30880.1	OQU77594	AT1G55190.1	21798944
AT2G30880.1	EES03891	AT3G54120.1	21798944
AT2G30880.1	OQU78555	AT3G54120.1	21798944
AT2G30880.1	KXG33215	AT4G00980.1	21798944
AT2G30880.1	EER88840	AT4G30080.1	21798944
AT2G30880.1	EER94066	AT4G30080.1	21798944
AT2G30880.1	EES05458	AT4G30080.1	21798944
AT2G30880.1	KXG26729	AT4G30080.1	21798944
AT2G30880.1	KXG36152	AT4G30080.1	21798944
AT2G30880.1	EES03822	AT5G01640.1	21798944
AT2G30880.1	EES15518	AT5G01640.1	21798944
AT2G30880.1	KXG22202	AT5G01640.1	21798944
AT2G30880.1	KXG38626	AT5G01640.1	21798944
AT2G30880.1	OQU79263	AT5G01640.1	21798944
AT2G30880.1	OQU82692	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007849_P002	Maize	cytosol, plastid	88.95	95.35
Zm00001d018772_P001	Maize	peroxisome	16.57	86.6
Os07t0138100-01	Rice	cytosol	80.28	84.09
TraesCS2D01G255300.2	Wheat	cytosol	80.08	83.54
TraesCS2B01G267300.1	Wheat	cytosol	78.5	83.44
TraesCS2A01G254800.2	Wheat	cytosol	79.88	83.33
HORVU2Hr1G060900.13	Barley	plastid	73.96	76.22
KXG37877	Sorghum	cytosol	59.57	60.4
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	58.58	59.64
KRH73621	Soybean	endoplasmic reticulum	57.2	59.18
KRH14510	Soybean	cytosol	57.0	58.98
GSMUA_Achr9P10020_001	Banana	cytosol	57.0	58.38
VIT_12s0028g00830.t01	Wine grape	cytosol	57.0	57.8
AT2G30880.1	Thale cress	cytosol, plastid	54.24	54.56
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	46.94	54.21
CDX97786	Canola	cytosol, plastid	53.25	53.89
CDY29635	Canola	cytosol, plastid	53.45	53.88
Bra021674.1-P	Field mustard	cytosol	53.45	53.88
Bra022817.1-P	Field mustard	cytosol	26.23	47.67
CDY23978	Canola	cytosol	37.08	40.34

Protein Annotations

EnsemblPlants:KXG34371	EnsemblPlantsGene:SORBI_3002G029300	Gene3D:2.30.29.30	InterPro:IPR001849	InterPro:IPR011993	InterPro:PH-like_dom_sf
InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR24356	PANTHER:PTHR24356:SF215	PFAM:PF00169	PFscan:PS50003
ProteinID:KXG34371	ProteinID:KXG34371.1	SEG:seg	SMART:SM00233	SUPFAM:SSF50729	UniParc:UPI00081AB9E5
UniProt:A0A1B6Q8Y1	MapMan:27.4.3.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:2694575..2699400

Molecular Weight (calculated)

56293.1 Da

IEP (calculated)

4.822

GRAVY (calculated)

-0.519

Length

507 amino acids

Sequence
(BLAST)

001: MSVRRTKRAV AVGRSWFGSS SSSCPAGWHR QEAMASNGSS STVVDEMQSS LDRVRRQLSS TSTRHLLQGP LLKRSDTLRK WNERWVILDP TTGKIEYKVR
101: RSDKDVRGVI MFDSTSTVTL SPMNFHGLAK YDGCCFYIGT PQKKEYFLCA ETPSAARAWV STLHATQLVL QAHKEAVNSL GENGPAKLGT VATVVAVANA
201: TAIEATKEVE AAMKISLRAA LGSTTNKLTK GQLDDLTIMM ETLRVKDDEL HQLLQDIRAR DSTINEIADK LQETAEAAET AASAARSIDE ERRFFTSELE
301: RLKQDHEKQA ESSLLRLRES EEKAKLLVEE RDRLLTERDS ALQEAQMWRS ELGKARGNAV ILEAAVVRAE EKARVSAADA DIRIKEAMSR LESAIKEKED
401: LLALVDALRS QIQSRQETST IQVCEESSEL CSTASKHMED DNVDKACVSD TDPIPVTENI VELDDEGVDI PTVRDTEWDN PHSSEVSDVR EVTTEPEENS
501: LDIPVDT

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.