CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88840
EER94066
EES00126
EES03822
EES03891
EES05458
EES15518
KXG22202
KXG26729
KXG33215
KXG36152
KXG38626
OQU77594
OQU78555
OQU79263
OQU82692

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	EES00126	AT1G55190.1	21798944
AT2G30880.1	OQU77594	AT1G55190.1	21798944
AT2G30880.1	EES03891	AT3G54120.1	21798944
AT2G30880.1	OQU78555	AT3G54120.1	21798944
AT2G30880.1	KXG33215	AT4G00980.1	21798944
AT2G30880.1	EER88840	AT4G30080.1	21798944
AT2G30880.1	EER94066	AT4G30080.1	21798944
AT2G30880.1	EES05458	AT4G30080.1	21798944
AT2G30880.1	KXG26729	AT4G30080.1	21798944
AT2G30880.1	KXG36152	AT4G30080.1	21798944
AT2G30880.1	EES03822	AT5G01640.1	21798944
AT2G30880.1	EES15518	AT5G01640.1	21798944
AT2G30880.1	KXG22202	AT5G01640.1	21798944
AT2G30880.1	KXG38626	AT5G01640.1	21798944
AT2G30880.1	OQU79263	AT5G01640.1	21798944
AT2G30880.1	OQU82692	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013589_P006	Maize	cytosol, plastid	96.0	96.0
Os03t0666200-01	Rice	plasma membrane	92.0	92.0
TraesCS4D01G017000.2	Wheat	cytosol, plastid	90.6	90.6
TraesCS4A01G294800.1	Wheat	cytosol, plastid	90.4	90.4
HORVU4Hr1G002870.1	Barley	cytosol	79.0	89.77
TraesCS4B01G018800.2	Wheat	cytosol, plastid	90.4	84.17
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	73.6	73.9
Os05t0128700-00	Rice	cytosol	11.8	73.75
Os12t0505950-00	Rice	cytosol	11.8	73.75
GSMUA_Achr9P10020_001	Banana	cytosol	69.4	70.1
Os05t0153901-00	Rice	cytosol	11.2	70.0
VIT_12s0028g00830.t01	Wine grape	cytosol	69.0	69.0
KRH73621	Soybean	endoplasmic reticulum	65.2	66.53
KRH14510	Soybean	cytosol	64.8	66.12
AT2G30880.1	Thale cress	cytosol, plastid	63.4	62.9
CDX97786	Canola	cytosol, plastid	62.6	62.48
Bra021674.1-P	Field mustard	cytosol	62.4	62.03
CDY29635	Canola	cytosol, plastid	62.4	62.03
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	53.6	61.05
KXG34371	Sorghum	mitochondrion	60.4	59.57
Bra022817.1-P	Field mustard	cytosol	29.2	52.33
CDY23978	Canola	cytosol	42.8	45.92

Protein Annotations

Gene3D:2.30.29.30	MapMan:27.4.3.3	UniProt:A0A1B6QIY9	ncoils:Coil	InterPro:IPR001849	InterPro:IPR011993
EnsemblPlants:KXG37877	ProteinID:KXG37877	ProteinID:KXG37877.1	PFAM:PF00169	InterPro:PH-like_dom_sf	InterPro:PH_domain
PFscan:PS50003	PANTHER:PTHR24356	PANTHER:PTHR24356:SF215	SMART:SM00233	EnsemblPlantsGene:SORBI_3001G143500	SUPFAM:SSF50729
UniParc:UPI0001C80C05	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:11509156..11513540

Molecular Weight (calculated)

54482.2 Da

IEP (calculated)

4.977

GRAVY (calculated)

-0.477

Length

500 amino acids

Sequence
(BLAST)

001: MATNGSSARV RDTESSLEKV KRQLSSGSGR YLLQGPLLKR SETLRKWNER WVILDPTSGK MEYKLRRNET AIKGTILFDA SSTITLSPVN FQGMPKYDGC
101: CFYIGTPQKK DYFLCAETPG AAKAWVSTLH ATQLVLRAHK EAVNSLAGNG SSATLGTVAT AVANANATAM EATKEIEAAL KVSMRAALGL GTNNSNEGQL
201: DDLTIMKETL RVKDEELQHL AKDIRSRDST IKEIADKLTE TAEAAEAAAS AAHTMDEQRR LLCLEIERLK QALERQIEQS MLKLGQSEEK VISLSKEKEQ
301: LMKERDAAFQ EAHMWRIELG KAREQAVIQE ATIARAEEKA RVSEADAAAR IKEAAEKLHT VEKEKEELLA LVSVLQSQVQ REQSSTKQVC EERSESCSGA
401: DNSPPLTKHV DASDDDVDKA CVSDSRSVLV SSDSTEVQLA VDGVDIRPVG DAEWGGFQQS EALIADVREV SPEADGGSLD IPVVNPPPVS DHIQGGATHP

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.