Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011680_P002 | Maize | cytosol | 77.05 | 67.46 |
| Os01t0706000-01 | Rice | nucleus | 65.03 | 64.67 |
| TraesCS3B01G284700.1 | Wheat | nucleus | 60.66 | 58.12 |
| TraesCS3B01G288800.1 | Wheat | nucleus | 60.11 | 57.89 |
| TraesCS3D01G253600.1 | Wheat | nucleus | 59.56 | 57.07 |
| TraesCS3A01G256000.1 | Wheat | nucleus | 59.02 | 56.84 |
| GSMUA_Achr8P05370_001 | Banana | nucleus | 51.91 | 55.88 |
| CDY05125 | Canola | nucleus | 46.99 | 53.75 |
| Bra000728.1-P | Field mustard | nucleus | 46.99 | 52.76 |
| AT4G10920.2 | Thale cress | nucleus | 47.54 | 52.73 |
| CDX90784 | Canola | nucleus | 47.54 | 52.73 |
| KRH60062 | Soybean | nucleus | 46.45 | 51.2 |
| VIT_02s0025g01700.t01 | Wine grape | nucleus | 50.82 | 49.73 |
| PGSC0003DMT400031971 | Potato | nucleus | 45.9 | 49.41 |
| Solyc08g082580.2.1 | Tomato | nucleus | 45.9 | 48.0 |
| KRH41342 | Soybean | nucleus | 48.63 | 44.72 |
| HORVU3Hr1G066410.6 | Barley | cytosol | 39.34 | 38.1 |
| Zm00001d043705_P005 | Maize | nucleus | 75.96 | 34.66 |
| EES05235 | Sorghum | nucleus | 16.39 | 29.7 |
| KRH68921 | Soybean | nucleus | 40.98 | 13.44 |
| KRG97195 | Soybean | endoplasmic reticulum, golgi, vacuole | 38.25 | 12.77 |
| Bra037396.1-P | Field mustard | nucleus | 26.78 | 10.56 |
| CDY48492 | Canola | nucleus | 26.78 | 10.52 |
| CDY07161 | Canola | nucleus | 26.23 | 10.37 |
| AT4G00980.1 | Thale cress | nucleus | 25.14 | 9.43 |
Protein Annotations
| Gene3D:2.30.31.10 | MapMan:35.1 | EntrezGene:8059156 | UniProt:A0A1B6Q5M2 | ncoils:Coil | InterPro:DEK_C |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR009044 |
| InterPro:KELP | EnsemblPlants:KXG33215 | ProteinID:KXG33215 | ProteinID:KXG33215.1 | InterPro:PC4 | PFAM:PF02229 |
| PFAM:PF08766 | PIRSF:PIRSF038156 | PANTHER:PTHR13215 | PANTHER:PTHR13215:SF6 | EnsemblPlantsGene:SORBI_3003G272300 | SUPFAM:SSF109715 |
| SUPFAM:SSF54447 | UniParc:UPI0001C80A2C | SEG:seg | InterPro:ssDNA-bd_transcriptional_reg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:60853937..60857375
Molecular Weight (calculated)
20700.9 Da
IEP (calculated)
4.247
GRAVY (calculated)
-0.956
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEATKKKVE AAVLEILRGS DMESVTEYKV RKAAADRLGI DLSTPDRKLF VRGVVEEYLR SLSSQEEAEA EEEQGGAGRE SKDKEQEEEE EEEDDEEEEG
101: KGGGKREYDD QGDLILCRLS NKRRVTLSEF KGRSLVSIRE FYVKDGKEMP SAKGISMTME QWEAFCNAVP AIEDAIKKFE DSD
101: KGGGKREYDD QGDLILCRLS NKRRVTLSEF KGRSLVSIRE FYVKDGKEMP SAKGISMTME QWEAFCNAVP AIEDAIKKFE DSD
001: MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF VRSVVEKFLD EERAREYENS QVNKEEEDGD KDCGKGNKEF DDDGDLIICR
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
Arabidopsis Description
KELPUncharacterized protein At4g10920 [Source:UniProtKB/TrEMBL;Acc:Q0WP62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.