Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33215 | Sorghum | nucleus | 67.46 | 77.05 |
| Os01t0706000-01 | Rice | nucleus | 56.94 | 64.67 |
| TraesCS3B01G284700.1 | Wheat | nucleus | 52.63 | 57.59 |
| GSMUA_Achr8P05370_001 | Banana | nucleus | 46.41 | 57.06 |
| TraesCS3B01G288800.1 | Wheat | nucleus | 51.67 | 56.84 |
| TraesCS3D01G253600.1 | Wheat | nucleus | 51.67 | 56.54 |
| TraesCS3A01G256000.1 | Wheat | nucleus | 50.72 | 55.79 |
| CDY05125 | Canola | nucleus | 40.67 | 53.12 |
| AT4G10920.2 | Thale cress | nucleus | 41.63 | 52.73 |
| Bra000728.1-P | Field mustard | nucleus | 40.67 | 52.15 |
| CDX90784 | Canola | nucleus | 41.15 | 52.12 |
| KRH60062 | Soybean | nucleus | 39.71 | 50.0 |
| Solyc08g082580.2.1 | Tomato | nucleus | 41.63 | 49.71 |
| PGSC0003DMT400031971 | Potato | nucleus | 40.19 | 49.41 |
| VIT_02s0025g01700.t01 | Wine grape | nucleus | 44.02 | 49.2 |
| KRH41342 | Soybean | nucleus | 41.63 | 43.72 |
| HORVU3Hr1G066410.6 | Barley | cytosol | 34.45 | 38.1 |
| Zm00001d043705_P005 | Maize | nucleus | 62.2 | 32.42 |
| Zm00001d016803_P001 | Maize | nucleus | 16.75 | 18.92 |
| KRG97195 | Soybean | endoplasmic reticulum, golgi, vacuole | 35.89 | 13.69 |
| KRH68921 | Soybean | nucleus | 36.36 | 13.62 |
| CDY07161 | Canola | nucleus | 24.88 | 11.23 |
| Bra037396.1-P | Field mustard | nucleus | 24.88 | 11.21 |
| CDY48492 | Canola | nucleus | 24.88 | 11.16 |
| AT4G00980.1 | Thale cress | nucleus | 22.49 | 9.63 |
Protein Annotations
| EntrezGene:100384655 | Gene3D:2.30.31.10 | MapMan:35.1 | ProteinID:AQK97723.1 | InterPro:DEK_C | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR009044 | UniProt:K7W0N3 |
| InterPro:KELP | InterPro:PC4 | PFAM:PF02229 | PFAM:PF08766 | PIRSF:PIRSF038156 | PANTHER:PTHR13215 |
| PANTHER:PTHR13215:SF6 | SUPFAM:SSF109715 | SUPFAM:SSF54447 | UniParc:UPI0002220783 | EnsemblPlantsGene:Zm00001d011680 | EnsemblPlants:Zm00001d011680_P002 |
| EnsemblPlants:Zm00001d011680_T002 | SEG:seg | InterPro:ssDNA-bd_transcriptional_reg | : | : | : |
Description
p15 (PC4 Sub1)-transcription factor 3RNA polymerase II transcriptional coactivator KELP
Coordinates
chr8:-:158512216..158527236
Molecular Weight (calculated)
23335.3 Da
IEP (calculated)
4.300
GRAVY (calculated)
-0.525
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEATKKNVE ATVLEILRGS DMESVTEYKV RAAASDRLGI DLSIPDRKLF VRGVVEEYLL SLSSKEEAKA EEEGVTGRES KGKEHEEEDE EDDDEEEDEG
101: KGGGKREYDD QGDLILCRLS SKRRVTLSEF KGRSLVSIRE FYVKDGKEMP SAKGYASPVF SCIFRSLFSA VIVLPLVSSC ISMTLEQWEA FCNAVPAIED
201: AIKKLEDSD
101: KGGGKREYDD QGDLILCRLS SKRRVTLSEF KGRSLVSIRE FYVKDGKEMP SAKGYASPVF SCIFRSLFSA VIVLPLVSSC ISMTLEQWEA FCNAVPAIED
201: AIKKLEDSD
001: MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF VRSVVEKFLD EERAREYENS QVNKEEEDGD KDCGKGNKEF DDDGDLIICR
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
Arabidopsis Description
KELPUncharacterized protein At4g10920 [Source:UniProtKB/TrEMBL;Acc:Q0WP62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.