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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000728.1-P Field mustard nucleus 75.15 76.07
CDX90784 Canola nucleus 74.55 74.55
CDY05125 Canola nucleus 72.12 74.38
PGSC0003DMT400031971 Potato nucleus 56.97 55.29
Solyc08g082580.2.1 Tomato nucleus 58.18 54.86
Os01t0706000-01 Rice nucleus 54.55 48.91
GSMUA_Achr8P05370_001 Banana nucleus 50.3 48.82
TraesCS3D01G253600.1 Wheat nucleus 55.76 48.17
TraesCS3B01G284700.1 Wheat nucleus 55.15 47.64
KXG33215 Sorghum nucleus 52.73 47.54
TraesCS3A01G256000.1 Wheat nucleus 54.55 47.37
TraesCS3B01G288800.1 Wheat nucleus 54.55 47.37
Zm00001d011680_P002 Maize cytosol 52.73 41.63
HORVU3Hr1G066410.6 Barley cytosol 30.91 26.98
AT5G09250.4 Thale cress nucleus 18.79 26.05
Zm00001d043705_P005 Maize nucleus 51.52 21.2
AT5G09240.2 Thale cress nucleus 17.58 21.01
AT4G00980.1 Thale cress nucleus 36.97 12.5
Protein Annotations
Gene3D:2.30.31.10MapMan:35.1EntrezGene:826690ProteinID:AAC33951.1ProteinID:AEE82943.1ProteinID:AEE82944.1
EMBL:AF053303EMBL:AK228302EMBL:AK229220ArrayExpress:AT4G10920EnsemblPlantsGene:AT4G10920RefSeq:AT4G10920
TAIR:AT4G10920RefSeq:AT4G10920-TAIR-GEnsemblPlants:AT4G10920.2TAIR:AT4G10920.2EMBL:AY085896Unigene:At.21693
EMBL:BT005847ProteinID:CAB40060.1ProteinID:CAB81193.1InterPro:DEK_CGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003713GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005667GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016043GO:GO:0060261
InterPro:IPR009044InterPro:KELPSymbol:KELPRefSeq:NP_001078372.1RefSeq:NP_192830.1UniProt:O65155
InterPro:PC4PFAM:PF02229PFAM:PF08766PIRSF:PIRSF038156PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0006339PO:PO:0006340PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PANTHER:PTHR13215PANTHER:PTHR13215:SF6UniProt:Q0WP62SUPFAM:SSF109715SUPFAM:SSF54447
UniParc:UPI0000048929SEG:segInterPro:ssDNA-bd_transcriptional_reg:::
Description
KELPUncharacterized protein At4g10920 [Source:UniProtKB/TrEMBL;Acc:Q0WP62]
Coordinates
chr4:-:6696712..6699199
Molecular Weight (calculated)
19177.7 Da
IEP (calculated)
5.287
GRAVY (calculated)
-0.990
Length
165 amino acids
Sequence
(BLAST)
001: MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF VRSVVEKFLD EERAREYENS QVNKEEEDGD KDCGKGNKEF DDDGDLIICR
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.