Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40729 | Canola | nucleus | 63.87 | 71.03 |
| CDY44791 | Canola | nucleus | 52.94 | 58.88 |
| Bra028642.1-P | Field mustard | nucleus | 52.1 | 57.94 |
| Bra009372.1-P | Field mustard | nucleus | 50.42 | 56.07 |
| CDX69917 | Canola | nucleus | 50.42 | 56.07 |
| CDY21570 | Canola | nucleus | 50.42 | 56.07 |
| VIT_07s0031g02500.t01 | Wine grape | nucleus | 41.18 | 47.57 |
| Solyc02g061790.2.1 | Tomato | nucleus | 40.34 | 46.6 |
| PGSC0003DMT400022353 | Potato | nucleus | 40.34 | 46.6 |
| GSMUA_Achr8P30150_001 | Banana | nucleus | 37.82 | 42.86 |
| AT5G09240.2 | Thale cress | nucleus | 46.22 | 39.86 |
| Os02t0553600-01 | Rice | nucleus | 33.61 | 39.6 |
| TraesCS5B01G301400.1 | Wheat | mitochondrion | 33.61 | 38.46 |
| TraesCS5D01G308200.1 | Wheat | cytosol, mitochondrion, nucleus | 32.77 | 38.24 |
| TraesCS5A01G299800.1 | Wheat | mitochondrion | 32.77 | 37.5 |
| EES05235 | Sorghum | nucleus | 30.25 | 35.64 |
| HORVU5Hr1G079060.3 | Barley | cytosol, nucleus | 30.25 | 31.86 |
| AT4G10920.2 | Thale cress | nucleus | 26.05 | 18.79 |
| Zm00001d016803_P001 | Maize | nucleus | 28.57 | 18.38 |
| AT4G00980.1 | Thale cress | nucleus | 16.81 | 4.1 |
Protein Annotations
| Gene3D:2.30.31.10 | MapMan:35.1 | EntrezGene:830784 | UniProt:A0A1P8BFY1 | ProteinID:ANM70522.1 | ArrayExpress:AT5G09250 |
| EnsemblPlantsGene:AT5G09250 | RefSeq:AT5G09250 | TAIR:AT5G09250 | RefSeq:AT5G09250-TAIR-G | EnsemblPlants:AT5G09250.4 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR009044 | Symbol:KIWI |
| RefSeq:NP_001332126.1 | InterPro:PC4 | PFAM:PF02229 | PANTHER:PTHR13215 | SUPFAM:SSF54447 | UniParc:UPI000848BD56 |
| SEG:seg | InterPro:ssDNA-bd_transcriptional_reg | : | : | : | : |
Description
KIWIssDNA-binding transcriptional regulator [Source:TAIR;Acc:AT5G09250]
Coordinates
chr5:-:2875188..2876609
Molecular Weight (calculated)
13369.8 Da
IEP (calculated)
9.169
GRAVY (calculated)
-0.453
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRGKRKDE DVRASDDESE THAPAKKVAK PADDSDQSDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GISLSVDQVL TSLSISLHCF
101: MSPRSVSVFL LFAYYTAFP
101: MSPRSVSVFL LFAYYTAFP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.