Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0553600-01 | Rice | nucleus | 55.24 | 57.43 |
| KRH53937 | Soybean | nucleus | 56.19 | 56.19 |
| Solyc02g061790.2.1 | Tomato | nucleus | 54.29 | 55.34 |
| PGSC0003DMT400022353 | Potato | nucleus | 54.29 | 55.34 |
| VIT_07s0031g02500.t01 | Wine grape | nucleus | 52.38 | 53.4 |
| EES05235 | Sorghum | nucleus | 50.48 | 52.48 |
| TraesCS5D01G308200.1 | Wheat | cytosol, mitochondrion, nucleus | 49.52 | 50.98 |
| TraesCS5B01G301400.1 | Wheat | mitochondrion | 50.48 | 50.96 |
| TraesCS5A01G299800.1 | Wheat | mitochondrion | 49.52 | 50.0 |
| CDY21570 | Canola | nucleus | 49.52 | 48.6 |
| CDX69917 | Canola | nucleus | 49.52 | 48.6 |
| Bra009372.1-P | Field mustard | nucleus | 48.57 | 47.66 |
| CDY44791 | Canola | nucleus | 47.62 | 46.73 |
| Bra028642.1-P | Field mustard | nucleus | 46.67 | 45.79 |
| CDY40729 | Canola | nucleus | 45.71 | 44.86 |
| KRH64003 | Soybean | nucleus | 45.71 | 41.74 |
| AT5G09250.4 | Thale cress | nucleus | 42.86 | 37.82 |
| HORVU5Hr1G079060.3 | Barley | cytosol, nucleus | 37.14 | 34.51 |
| Zm00001d016803_P001 | Maize | nucleus | 46.67 | 26.49 |
| AT5G09240.2 | Thale cress | nucleus | 33.33 | 25.36 |
| GSMUA_Achr8P05370_001 | Banana | nucleus | 33.33 | 20.59 |
Protein Annotations
| Gene3D:2.30.31.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G30150_001 | EnsemblPlants:GSMUA_Achr8P30150_001 | EnsemblPlants:GSMUA_Achr8T30150_001 | InterPro:IPR009044 | UniProt:M0TUW7 |
| InterPro:PC4 | PFAM:PF02229 | PANTHER:PTHR13215 | SUPFAM:SSF54447 | UniParc:UPI000294B241 | SEG:seg |
| InterPro:ssDNA-bd_transcriptional_reg | : | : | : | : | : |
Description
RNA polymerase II transcriptional coactivator KIWI [Source:GMGC_GENE;Acc:GSMUA_Achr8G30150_001]
Coordinates
chr8:+:32313176..32318226
Molecular Weight (calculated)
11818.0 Da
IEP (calculated)
8.477
GRAVY (calculated)
-0.876
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKKGWKRKN EEGAGGDGAA PSRKFAKKDS DDDGGDDGIV VCQISKNRRV SVRLWQGKVV VDIREFYVKD GKELPGKKGI SLPMDQWKVM LDHIDEIDEA
101: VKENS
101: VKENS
001: MSSRGKRKDE DVRASDDESE THAPAKKVAK PADDSDQSDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GISLSVDQWN TLRNHAEDIE
101: KALSDLS
101: KALSDLS
Arabidopsis Description
KIWIssDNA-binding transcriptional regulator [Source:TAIR;Acc:AT5G09250]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.