Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69917 | Canola | nucleus | 100.0 | 100.0 |
| Bra009372.1-P | Field mustard | nucleus | 98.13 | 98.13 |
| CDY44791 | Canola | nucleus | 89.72 | 89.72 |
| CDY40729 | Canola | nucleus | 79.44 | 79.44 |
| KRH53937 | Soybean | nucleus | 58.88 | 60.0 |
| Solyc02g061790.2.1 | Tomato | nucleus | 57.01 | 59.22 |
| PGSC0003DMT400022353 | Potato | nucleus | 57.01 | 59.22 |
| VIT_07s0031g02500.t01 | Wine grape | nucleus | 48.6 | 50.49 |
| AT5G09250.4 | Thale cress | nucleus | 56.07 | 50.42 |
| GSMUA_Achr8P30150_001 | Banana | nucleus | 48.6 | 49.52 |
| Os02t0553600-01 | Rice | nucleus | 45.79 | 48.51 |
| TraesCS5B01G301400.1 | Wheat | mitochondrion | 42.99 | 44.23 |
| EES05235 | Sorghum | nucleus | 41.12 | 43.56 |
| KRH64003 | Soybean | nucleus | 46.73 | 43.48 |
| TraesCS5D01G308200.1 | Wheat | cytosol, mitochondrion, nucleus | 41.12 | 43.14 |
| TraesCS5A01G299800.1 | Wheat | mitochondrion | 40.19 | 41.35 |
| HORVU5Hr1G079060.3 | Barley | cytosol, nucleus | 33.64 | 31.86 |
| Zm00001d016803_P001 | Maize | nucleus | 37.38 | 21.62 |
| CDX90784 | Canola | nucleus | 28.97 | 18.79 |
| CDY05125 | Canola | nucleus | 27.1 | 18.12 |
| CDY07161 | Canola | nucleus | 21.5 | 4.97 |
| CDY48492 | Canola | nucleus | 20.56 | 4.72 |
Protein Annotations
| Gene3D:2.30.31.10 | MapMan:35.1 | GO:A0A078BZS7 | UniProt:A0A078BZS7 | EnsemblPlants:CDY21570 | ProteinID:CDY21570 |
| ProteinID:CDY21570.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00016033001 | InterPro:IPR009044 | InterPro:PC4 | PFAM:PF02229 | PANTHER:PTHR13215 | SUPFAM:SSF54447 |
| UniParc:UPI0004EE5D88 | InterPro:ssDNA-bd_transcriptional_reg | : | : | : | : |
Description
BnaC09g47220DBnaA10g22660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078BZS7]
Coordinates
chrLK032122:-:295834..297100
Molecular Weight (calculated)
12068.0 Da
IEP (calculated)
8.495
GRAVY (calculated)
-0.915
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWRGKRKDE DVRASDDDSE THAPAKKLAK PAESSDESDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GISLSVDQWN TLRNHADGID
101: KALADLS
101: KALADLS
001: MSSRGKRKDE DVRASDDESE THAPAKKVAK PADDSDQSDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GISLSVDQWN TLRNHAEDIE
101: KALSDLS
101: KALSDLS
Arabidopsis Description
KIWIssDNA-binding transcriptional regulator [Source:TAIR;Acc:AT5G09250]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.