Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44791 | Canola | nucleus | 82.24 | 82.24 |
| CDX69917 | Canola | nucleus | 79.44 | 79.44 |
| CDY21570 | Canola | nucleus | 79.44 | 79.44 |
| AT5G09250.4 | Thale cress | nucleus | 71.03 | 63.87 |
| VIT_07s0031g02500.t01 | Wine grape | nucleus | 53.27 | 55.34 |
| PGSC0003DMT400022353 | Potato | nucleus | 52.34 | 54.37 |
| Solyc02g061790.2.1 | Tomato | nucleus | 52.34 | 54.37 |
| KRH53937 | Soybean | nucleus | 48.6 | 49.52 |
| Os02t0553600-01 | Rice | nucleus | 43.93 | 46.53 |
| GSMUA_Achr8P30150_001 | Banana | nucleus | 44.86 | 45.71 |
| TraesCS5B01G301400.1 | Wheat | mitochondrion | 42.99 | 44.23 |
| TraesCS5D01G308200.1 | Wheat | cytosol, mitochondrion, nucleus | 41.12 | 43.14 |
| TraesCS5A01G299800.1 | Wheat | mitochondrion | 41.12 | 42.31 |
| EES05235 | Sorghum | nucleus | 39.25 | 41.58 |
| KRH64003 | Soybean | nucleus | 37.38 | 34.78 |
| HORVU5Hr1G079060.3 | Barley | cytosol, nucleus | 33.64 | 31.86 |
| Zm00001d016803_P001 | Maize | nucleus | 35.51 | 20.54 |
| CDX90784 | Canola | nucleus | 29.91 | 19.39 |
| CDY05125 | Canola | nucleus | 28.04 | 18.75 |
| CDY07161 | Canola | nucleus | 23.36 | 5.4 |
| CDY48492 | Canola | nucleus | 23.36 | 5.36 |
Protein Annotations
| Gene3D:2.30.31.10 | MapMan:35.1 | GO:A0A078HTS3 | UniProt:A0A078HTS3 | EnsemblPlants:CDY40729 | ProteinID:CDY40729 |
| ProteinID:CDY40729.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00071624001 | InterPro:IPR009044 | InterPro:PC4 | PFAM:PF02229 | PANTHER:PTHR13215 | SUPFAM:SSF54447 |
| UniParc:UPI0004EDFF0F | SEG:seg | InterPro:ssDNA-bd_transcriptional_reg | : | : | : |
Description
BnaAnng05920DBnaAnng05920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTS3]
Coordinates
chrLK032478:+:47081..48281
Molecular Weight (calculated)
12022.0 Da
IEP (calculated)
8.495
GRAVY (calculated)
-0.940
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWRGKRKDD GVRASDDDSE PHAPAKKVAK PAEDSDESDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GISLSVDQWN TLRNHAGDID
101: KALSDLS
101: KALSDLS
001: MSSRGKRKDE DVRASDDESE THAPAKKVAK PADDSDQSDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GISLSVDQWN TLRNHAEDIE
101: KALSDLS
101: KALSDLS
Arabidopsis Description
KIWIssDNA-binding transcriptional regulator [Source:TAIR;Acc:AT5G09250]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.