Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g061790.2.1 | Tomato | nucleus | 60.19 | 60.19 |
| PGSC0003DMT400022353 | Potato | nucleus | 58.25 | 58.25 |
| KRH53937 | Soybean | nucleus | 55.34 | 54.29 |
| CDY40729 | Canola | nucleus | 55.34 | 53.27 |
| GSMUA_Achr8P30150_001 | Banana | nucleus | 53.4 | 52.38 |
| CDX69917 | Canola | nucleus | 50.49 | 48.6 |
| CDY21570 | Canola | nucleus | 50.49 | 48.6 |
| Bra009372.1-P | Field mustard | nucleus | 49.51 | 47.66 |
| Bra028642.1-P | Field mustard | nucleus | 49.51 | 47.66 |
| CDY44791 | Canola | nucleus | 49.51 | 47.66 |
| Os02t0553600-01 | Rice | nucleus | 43.69 | 44.55 |
| TraesCS5B01G301400.1 | Wheat | mitochondrion | 43.69 | 43.27 |
| TraesCS5D01G308200.1 | Wheat | cytosol, mitochondrion, nucleus | 42.72 | 43.14 |
| EES05235 | Sorghum | nucleus | 41.75 | 42.57 |
| TraesCS5A01G299800.1 | Wheat | mitochondrion | 42.72 | 42.31 |
| AT5G09250.4 | Thale cress | nucleus | 47.57 | 41.18 |
| KRH64003 | Soybean | nucleus | 42.72 | 38.26 |
| HORVU5Hr1G079060.3 | Barley | cytosol, nucleus | 31.07 | 28.32 |
| AT5G09240.2 | Thale cress | nucleus | 34.95 | 26.09 |
| Zm00001d016803_P001 | Maize | nucleus | 37.86 | 21.08 |
| VIT_02s0025g01700.t01 | Wine grape | nucleus | 33.98 | 18.72 |
Protein Annotations
| EntrezGene:100245748 | wikigene:100245748 | Gene3D:2.30.31.10 | MapMan:35.1 | UniProt:A5BZH1 | EMBL:AM476780 |
| ProteinID:CAN79502 | ProteinID:CAN79502.1 | ProteinID:CBI21602 | ProteinID:CBI21602.3 | EMBL:FN595233 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0060261 | InterPro:IPR009044 |
| EntrezGene:LOC100245748 | wikigene:LOC100245748 | InterPro:PC4 | PFAM:PF02229 | PANTHER:PTHR13215 | SUPFAM:SSF54447 |
| TIGR:TC58152 | UniParc:UPI0001524D30 | ArrayExpress:VIT_07s0031g02500 | EnsemblPlantsGene:VIT_07s0031g02500 | EnsemblPlants:VIT_07s0031g02500.t01 | unigene:Vvi.377 |
| RefSeq:XP_002275126 | RefSeq:XP_002275126.1 | SEG:seg | InterPro:ssDNA-bd_transcriptional_reg | : | : |
Description
No Description!
Coordinates
chr7:+:18689366..18700553
Molecular Weight (calculated)
11754.7 Da
IEP (calculated)
7.516
GRAVY (calculated)
-1.068
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKWGKRKQS YASDGDSDDH APSKKSSMKD SDDPDNIIVC EISRNRRVSV RNWQGKVQVD IREFYVKDGK QMPGKKGISL TMDQWNVLRD HVNEIDEAVA
101: DNA
101: DNA
001: MSSRGKRKDE DVRASDDESE THAPAKKVAK PADDSDQSDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GISLSVDQWN TLRNHAEDIE
101: KALSDLS
101: KALSDLS
Arabidopsis Description
KIWIssDNA-binding transcriptional regulator [Source:TAIR;Acc:AT5G09250]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.