Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G308200.1 | Wheat | cytosol, mitochondrion, nucleus | 57.52 | 63.73 |
| TraesCS5B01G301400.1 | Wheat | mitochondrion | 56.64 | 61.54 |
| TraesCS5A01G299800.1 | Wheat | mitochondrion | 56.64 | 61.54 |
| Os02t0553600-01 | Rice | nucleus | 46.02 | 51.49 |
| EES05235 | Sorghum | nucleus | 45.13 | 50.49 |
| GSMUA_Achr8P30150_001 | Banana | nucleus | 34.51 | 37.14 |
| KRH53937 | Soybean | nucleus | 33.63 | 36.19 |
| PGSC0003DMT400022353 | Potato | nucleus | 32.74 | 35.92 |
| Solyc02g061790.2.1 | Tomato | nucleus | 31.86 | 34.95 |
| Bra009372.1-P | Field mustard | nucleus | 32.74 | 34.58 |
| CDY40729 | Canola | nucleus | 31.86 | 33.64 |
| CDY44791 | Canola | nucleus | 31.86 | 33.64 |
| CDY21570 | Canola | nucleus | 31.86 | 33.64 |
| CDX69917 | Canola | nucleus | 31.86 | 33.64 |
| Bra028642.1-P | Field mustard | nucleus | 31.86 | 33.64 |
| VIT_07s0031g02500.t01 | Wine grape | nucleus | 28.32 | 31.07 |
| KRH64003 | Soybean | nucleus | 30.97 | 30.43 |
| AT5G09250.4 | Thale cress | nucleus | 31.86 | 30.25 |
| Zm00001d016803_P001 | Maize | nucleus | 42.48 | 25.95 |
| AT5G09240.2 | Thale cress | nucleus | 23.89 | 19.57 |
| HORVU3Hr1G066410.6 | Barley | cytosol | 10.62 | 6.35 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G079060.3 | EnsemblPlantsGene:HORVU5Hr1G079060 | Gene3D:2.30.31.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003713 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR009044 | InterPro:PC4 | InterPro:ssDNA-bd_transcriptional_reg | PANTHER:PTHR13215 |
| PFAM:PF02229 | SUPFAM:SSF54447 | UniParc:UPI000B485239 | UniProt:A0A287RXL1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr5H:+:556297864..556299975
Molecular Weight (calculated)
12486.2 Da
IEP (calculated)
10.475
GRAVY (calculated)
-0.590
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: GQPPAKRQAA GKDGPSEETD DGIVVAQISK NKRVAVRSWN GKVMVDMREF YVKDGKSLPT RKGMYIALNG SVGDTEGQHQ SHRRGRQGEH LMEKAVKEIL
101: LGKVLLIRCL SML
101: LGKVLLIRCL SML
1: MSSRGKRKDE DVRASDDESE THAPAKKVAK PADDSDQSDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GNFIL
Arabidopsis Description
KIWIssDNA-binding transcriptional regulator [Source:TAIR;Acc:AT5G09250]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.