Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g061790.2.1 | Tomato | nucleus | 97.09 | 97.09 |
| KRH53937 | Soybean | nucleus | 62.14 | 60.95 |
| VIT_07s0031g02500.t01 | Wine grape | nucleus | 58.25 | 58.25 |
| CDX69917 | Canola | nucleus | 59.22 | 57.01 |
| CDY21570 | Canola | nucleus | 59.22 | 57.01 |
| Bra009372.1-P | Field mustard | nucleus | 58.25 | 56.07 |
| GSMUA_Achr8P30150_001 | Banana | nucleus | 55.34 | 54.29 |
| Bra028642.1-P | Field mustard | nucleus | 56.31 | 54.21 |
| CDY44791 | Canola | nucleus | 56.31 | 54.21 |
| CDY40729 | Canola | nucleus | 54.37 | 52.34 |
| TraesCS5D01G308200.1 | Wheat | cytosol, mitochondrion, nucleus | 48.54 | 49.02 |
| EES05235 | Sorghum | nucleus | 47.57 | 48.51 |
| TraesCS5A01G299800.1 | Wheat | mitochondrion | 48.54 | 48.08 |
| Os02t0553600-01 | Rice | nucleus | 46.6 | 47.52 |
| TraesCS5B01G301400.1 | Wheat | mitochondrion | 46.6 | 46.15 |
| KRH64003 | Soybean | nucleus | 47.57 | 42.61 |
| AT5G09250.4 | Thale cress | nucleus | 46.6 | 40.34 |
| HORVU5Hr1G079060.3 | Barley | cytosol, nucleus | 35.92 | 32.74 |
| AT5G09240.2 | Thale cress | nucleus | 40.78 | 30.43 |
| Zm00001d016803_P001 | Maize | nucleus | 43.69 | 24.32 |
| PGSC0003DMT400031971 | Potato | nucleus | 30.1 | 18.24 |
Protein Annotations
| EntrezGene:102591666 | Gene3D:2.30.31.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003713 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR009044 | UniProt:M1AGK6 | InterPro:PC4 | PFAM:PF02229 |
| EnsemblPlantsGene:PGSC0003DMG400008674 | PGSC:PGSC0003DMG400008674 | EnsemblPlants:PGSC0003DMT400022353 | PANTHER:PTHR13215 | SUPFAM:SSF54447 | UniParc:UPI000296EC45 |
| RefSeq:XP_006367162.1 | InterPro:ssDNA-bd_transcriptional_reg | : | : | : | : |
Description
RNA polymerase II transcriptional coactivator KIWI [Source:PGSC_GENE;Acc:PGSC0003DMG400008674]
Coordinates
chr2:+:19554811..19558217
Molecular Weight (calculated)
11781.7 Da
IEP (calculated)
5.011
GRAVY (calculated)
-1.066
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRFGKRKE ENEYASEGDN PPKKASRTDD SDDEDGIVVC EISKNRRVTV RSFGGRIMVD IREFYVKDGK QMPGRKGISL SMDQWNVLRE HADEIDEAVA
101: ENS
101: ENS
001: MSSRGKRKDE DVRASDDESE THAPAKKVAK PADDSDQSDD IVVCNISKNR RVSVRNWNGK IWIDIREFYV KDGKTLPGKK GISLSVDQWN TLRNHAEDIE
101: KALSDLS
101: KALSDLS
Arabidopsis Description
KIWIssDNA-binding transcriptional regulator [Source:TAIR;Acc:AT5G09250]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.