Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000728.1-P | Field mustard | nucleus | 93.94 | 95.09 |
| CDY05125 | Canola | nucleus | 85.45 | 88.12 |
| AT4G10920.2 | Thale cress | nucleus | 74.55 | 74.55 |
| PGSC0003DMT400031971 | Potato | nucleus | 57.58 | 55.88 |
| GSMUA_Achr8P05370_001 | Banana | nucleus | 56.36 | 54.71 |
| Solyc08g082580.2.1 | Tomato | nucleus | 57.58 | 54.29 |
| Os01t0706000-01 | Rice | nucleus | 58.79 | 52.72 |
| TraesCS3D01G253600.1 | Wheat | nucleus | 58.79 | 50.79 |
| TraesCS3B01G288800.1 | Wheat | nucleus | 57.58 | 50.0 |
| TraesCS3B01G284700.1 | Wheat | nucleus | 57.58 | 49.74 |
| TraesCS3A01G256000.1 | Wheat | nucleus | 56.36 | 48.95 |
| KXG33215 | Sorghum | nucleus | 52.73 | 47.54 |
| Zm00001d011680_P002 | Maize | cytosol | 52.12 | 41.15 |
| CDY40729 | Canola | nucleus | 19.39 | 29.91 |
| CDY21570 | Canola | nucleus | 18.79 | 28.97 |
| CDX69917 | Canola | nucleus | 18.79 | 28.97 |
| HORVU3Hr1G066410.6 | Barley | cytosol | 32.73 | 28.57 |
| CDY44791 | Canola | nucleus | 18.18 | 28.04 |
| Zm00001d043705_P005 | Maize | nucleus | 52.12 | 21.45 |
| CDY48492 | Canola | nucleus | 36.97 | 13.09 |
| CDY07161 | Canola | nucleus | 36.36 | 12.96 |
Protein Annotations
| Gene3D:2.30.31.10 | MapMan:35.1 | GO:A0A078DQP5 | EnsemblPlants:CDX90784 | ProteinID:CDX90784 | ProteinID:CDX90784.1 |
| ncoils:Coil | InterPro:DEK_C | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00151482001 | InterPro:IPR009044 | InterPro:KELP | InterPro:PC4 | PFAM:PF02229 |
| PFAM:PF08766 | PIRSF:PIRSF038156 | PANTHER:PTHR13215 | PANTHER:PTHR13215:SF6 | SUPFAM:SSF109715 | SUPFAM:SSF54447 |
| UniParc:UPI00000AACA7 | SEG:seg | InterPro:ssDNA-bd_transcriptional_reg | : | : | : |
Description
BnaA03g24640D
Coordinates
chrLK031864:+:507864..509059
Molecular Weight (calculated)
19240.6 Da
IEP (calculated)
4.672
GRAVY (calculated)
-1.055
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEESKAKIE ETVREILKES DMTEMTEFKV RNLASERLGI DLSDKSHKAF VRGIVKSFLE EVESKQQQQQ DKEEEEEEEE ERAKEGNKEF DDDGDLIICR
101: LSDKRRVTIQ EFRGKSLVSI REYYKKDGKE LPSSKGISLT DEQWSTFKKN IPAIEAAVKK MESRV
101: LSDKRRVTIQ EFRGKSLVSI REYYKKDGKE LPSSKGISLT DEQWSTFKKN IPAIEAAVKK MESRV
001: MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF VRSVVEKFLD EERAREYENS QVNKEEEDGD KDCGKGNKEF DDDGDLIICR
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
Arabidopsis Description
KELPUncharacterized protein At4g10920 [Source:UniProtKB/TrEMBL;Acc:Q0WP62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.