Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES10652 | Sorghum | cytosol | 95.62 | 95.62 |
| TraesCS2D01G284300.1 | Wheat | cytosol, extracellular | 81.75 | 83.58 |
| TraesCS2B01G302700.1 | Wheat | cytosol, extracellular | 81.75 | 83.58 |
| TraesCS2A01G285600.1 | Wheat | cytosol, extracellular | 81.75 | 83.58 |
| HORVU0Hr1G003840.1 | Barley | extracellular | 81.75 | 83.58 |
| Zm00001d016593_P001 | Maize | cytosol | 77.37 | 81.54 |
| GSMUA_Achr10P... | Banana | cytosol | 71.53 | 72.59 |
| GSMUA_Achr6P23860_001 | Banana | plastid | 71.53 | 72.06 |
| GSMUA_Achr3P18710_001 | Banana | cytosol | 69.34 | 71.43 |
| KRG94592 | Soybean | plastid | 68.61 | 71.21 |
| KRH06898 | Soybean | plastid | 68.61 | 70.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.96 | 68.46 |
| PGSC0003DMT400006076 | Potato | plastid | 64.23 | 65.67 |
| Solyc05g015910.1.1 | Tomato | cytosol | 62.77 | 65.65 |
| Zm00001d040837_P001 | Maize | cytosol | 48.91 | 65.05 |
| Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 56.93 | 65.0 |
| KRH70543 | Soybean | cytosol | 62.77 | 64.66 |
| PGSC0003DMT400013427 | Potato | mitochondrion, plastid | 56.2 | 64.17 |
| PGSC0003DMT400013435 | Potato | cytosol, plastid | 56.2 | 64.17 |
| Solyc01g009900.2.1 | Tomato | cytosol, plastid | 56.2 | 64.17 |
| Zm00001d023873_P001 | Maize | cytosol | 46.72 | 61.54 |
| Zm00001d023869_P001 | Maize | cytosol | 46.72 | 61.54 |
| Zm00001d040836_P001 | Maize | cytosol | 45.99 | 61.16 |
| AT3G02000.1 | Thale cress | cytosol | 60.58 | 61.03 |
| Zm00001d027695_P001 | Maize | cytosol | 45.99 | 60.58 |
| CDX91918 | Canola | cytosol | 58.39 | 59.7 |
| KRH01571 | Soybean | cytosol | 61.31 | 59.15 |
| CDX74327 | Canola | cytosol | 59.12 | 59.12 |
| Bra000980.1-P | Field mustard | cytosol | 59.12 | 59.12 |
| Zm00001d042187_P001 | Maize | cytosol | 47.45 | 58.56 |
| Solyc01g009890.1.1 | Tomato | cytosol, plastid | 55.47 | 58.46 |
| PGSC0003DMT400013430 | Potato | cytosol | 54.74 | 57.69 |
| Bra006236.1-P | Field mustard | cytosol | 56.93 | 57.35 |
| CDX78558 | Canola | cytosol | 56.93 | 56.93 |
| CDX70540 | Canola | cytosol | 56.93 | 56.93 |
| Bra023448.1-P | Field mustard | cytosol | 56.93 | 56.93 |
| CDX85614 | Canola | cytosol | 56.93 | 56.93 |
| Zm00001d023870_P001 | Maize | cytosol, extracellular | 43.07 | 56.73 |
| AT5G14070.1 | Thale cress | cytosol | 57.66 | 56.43 |
| VIT_01s0146g00220.t01 | Wine grape | cytosol | 64.23 | 56.41 |
| CDX91084 | Canola | cytosol | 55.47 | 55.47 |
| Zm00001d048719_P001 | Maize | cytosol | 44.53 | 55.45 |
| Bra008782.1-P | Field mustard | cytosol | 54.01 | 55.22 |
| Zm00001d023872_P001 | Maize | cytosol, mitochondrion | 41.61 | 54.29 |
| Zm00001d048720_P001 | Maize | cytosol | 43.07 | 53.15 |
| CDX69609 | Canola | cytosol | 35.04 | 47.52 |
| Zm00001d018802_P001 | Maize | cytosol | 50.37 | 43.4 |
| CDY58422 | Canola | cytosol | 45.99 | 37.5 |
Protein Annotations
| EntrezGene:100284396 | MapMan:18.8.2 | Gene3D:3.40.30.10 | UniProt:B6TT52 | EMBL:EU968167 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 |
| GO:GO:0055114 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:IPR002109 | ProteinID:ONM17983.1 | PFAM:PF00462 |
| PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF128 | SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | TMHMM:TMhelix |
| InterPro:Thioredoxin-like_sf | UniParc:UPI00016EFCB9 | EnsemblPlantsGene:Zm00001d003927 | EnsemblPlants:Zm00001d003927_P001 | EnsemblPlants:Zm00001d003927_T001 | SEG:seg |
Description
Grx_C8-glutaredoxin subgroup III
Coordinates
chr2:-:68997259..68997672
Molecular Weight (calculated)
14257.4 Da
IEP (calculated)
6.657
GRAVY (calculated)
0.488
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYGAAAAEQ AWSYMPVVAP SSAVETAAER VERLASESAV VVFSVSTCCM CHAVKRLFCG MGVHPTVHEL DHDPRGRELE RALACLLGAS GASAAGAPVV
101: PVVFIGGRLV GAMDRVMAAH INGTLVPLLK DAGALWL
101: PVVFIGGRLV GAMDRVMAAH INGTLVPLLK DAGALWL
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.