Factsheet for Zm00001d018802_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G271600.1	Wheat	cytosol	71.07	82.48
TraesCS2A01G251700.1	Wheat	cytosol	71.07	82.48
TraesCS2D01G252500.1	Wheat	cytosol	70.44	81.75
EER95872	Sorghum	cytosol	81.13	77.71
GSMUA_Achr4P22980_001	Banana	endoplasmic reticulum, extracellular	51.57	77.36
GSMUA_Achr7P01150_001	Banana	endoplasmic reticulum, extracellular	49.69	73.15
KRH58685	Soybean	cytosol	43.4	63.3
Solyc08g036570.1.1	Tomato	cytosol	48.43	61.11
PGSC0003DMT400046079	Potato	cytosol	49.06	60.47
Zm00001d040837_P001	Maize	cytosol	35.85	55.34
Os07t0151100-01	Rice	cytosol	66.67	55.21
Zm00001d016593_P001	Maize	cytosol	44.65	54.62
HORVU2Hr1G060300.1	Barley	cytosol	59.75	54.29
Zm00001d027695_P001	Maize	cytosol	34.59	52.88
KRH12792	Soybean	plastid	42.77	52.71
Zm00001d040836_P001	Maize	cytosol	33.96	52.43
Zm00001d023873_P001	Maize	cytosol	33.96	51.92
Zm00001d048719_P001	Maize	cytosol	35.22	50.91
Zm00001d003927_P001	Maize	cytosol	43.4	50.37
Zm00001d042187_P001	Maize	cytosol	34.59	49.55
KRH37754	Soybean	plastid	40.88	48.87
Zm00001d023869_P001	Maize	cytosol	31.45	48.08
Zm00001d048720_P001	Maize	cytosol	33.33	47.75
Zm00001d023870_P001	Maize	cytosol, extracellular	29.56	45.19
Zm00001d023872_P001	Maize	cytosol, mitochondrion	27.04	40.95
VIT_10s0003g03940.t01	Wine grape	mitochondrion	43.4	38.55

Protein Annotations

EntrezGene:103631945	MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A1D6HSI2	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	ProteinID:ONM51372.1	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF86	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0002216592
EnsemblPlantsGene:Zm00001d018802	EnsemblPlants:Zm00001d018802_P001	EnsemblPlants:Zm00001d018802_T001	SEG:seg	:	:

Description

male sterile22 male sterile22

Coordinates

chr7:+:5664064..5664543

Molecular Weight (calculated)

15958.7 Da

IEP (calculated)

7.387

GRAVY (calculated)

0.496

Length

159 amino acids

Sequence
(BLAST)

001: MLRMEVQQQQ QESGVSGGVV ADAAAASGAD AAPTTTTMVA AAPHSASALA VYERVARMAG GNAVVVFSAS GCCMCHVVKR LLLGLGVGPT VYELDQMAAG
101: GGGGREIQAA LAQLLPPGQP PLPVVFVGGR LLGGVEKVMA CHINGTLVPL LKQAGALWL

Best Arabidopsis Sequence Match ( AT5G14070.1 )
(BLAST)

001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL

Arabidopsis Description

GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.