Factsheet for Zm00001d048720_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002027_P002
Zm00001d003948_P001
Zm00001d011997_P001
Zm00001d017793_P001
Zm00001d018225_P001
Zm00001d018530_P001
Zm00001d025238_P001
Zm00001d025584_P001
Zm00001d025585_P001
Zm00001d037140_P004
Zm00001d044973_P001
Zm00001d050565_P001
Zm00001d051589_P001
Zm00001d052133_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT2G30540.1	Zm00001d051589_P001	AT3G27960.1	21798944
AT4G15700.1	Zm00001d002027_P002	AT1G22920.1	21798944
AT4G15700.1	Zm00001d018225_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d037140_P004	AT1G73360.1	21798944
AT4G15700.1	Zm00001d044973_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d052133_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d003948_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d011997_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025238_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025584_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025585_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d050565_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d003948_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d011997_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025238_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025584_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025585_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d050565_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d018530_P001	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08918	Sorghum	cytosol, plastid	87.39	92.38
Zm00001d048719_P001	Maize	cytosol	81.98	82.73
TraesCS4D01G147300.1	Wheat	cytosol	67.57	72.12
Zm00001d023873_P001	Maize	cytosol	63.96	68.27
Os11t0656000-00	Rice	cytosol, plastid	66.67	67.89
Os11t0656400-00	Rice	cytosol, plastid	66.67	67.89
Os11t0656700-00	Rice	cytosol, plastid	66.67	67.89
Zm00001d023870_P001	Maize	cytosol, extracellular	62.16	66.35
GSMUA_Achr8P09970_001	Banana	cytosol	59.46	64.08
Zm00001d040836_P001	Maize	cytosol	59.46	64.08
Zm00001d040837_P001	Maize	cytosol	58.56	63.11
Zm00001d023869_P001	Maize	cytosol	58.56	62.5
Zm00001d027695_P001	Maize	cytosol	57.66	61.54
GSMUA_Achr11P...	Banana	cytosol, extracellular	55.86	60.19
VIT_05s0020g01750.t01	Wine grape	cytosol	54.95	59.22
Zm00001d042187_P001	Maize	cytosol	58.56	58.56
Zm00001d023872_P001	Maize	cytosol, mitochondrion	54.05	57.14
KRH11237	Soybean	cytosol	51.35	55.88
AT3G21460.1	Thale cress	mitochondrion	50.45	54.9
KRH02215	Soybean	cytosol	50.45	54.9
KRH21036	Soybean	cytosol	50.45	54.9
KRG96386	Soybean	cytosol	49.55	54.46
KRH68125	Soybean	cytosol	49.55	54.46
Bra002171.1-P	Field mustard	cytosol	49.55	53.92
CDX92597	Canola	cytosol	49.55	53.92
CDY13904	Canola	cytosol	49.55	53.92
KRH11238	Soybean	cytosol	49.55	53.92
KRH21035	Soybean	cytosol	49.55	53.92
KRH50911	Soybean	cytosol	49.55	53.92
Solyc01g067460.1.1	Tomato	cytosol	49.55	53.92
VIT_05s0020g01760.t01	Wine grape	cytosol	49.55	53.92
Bra001831.1-P	Field mustard	cytosol	48.65	52.94
Bra023688.1-P	Field mustard	cytosol	48.65	52.94
CDY32431	Canola	cytosol	48.65	52.94
CDY48891	Canola	cytosol	48.65	52.94
CDY68328	Canola	cytosol	48.65	52.94
KRH50912	Soybean	cytosol	48.65	52.94
PGSC0003DMT400058374	Potato	cytosol	48.65	52.94
KRH31919	Soybean	cytosol, plasma membrane	47.75	52.48
KRH71536	Soybean	extracellular	47.75	52.48
Bra006467.1-P	Field mustard	cytosol	47.75	51.96
Bra023883.1-P	Field mustard	cytosol, plastid	47.75	51.96
CDX70828	Canola	cytosol	47.75	51.96
CDX88929	Canola	cytosol	47.75	51.96
CDY02610	Canola	cytosol	47.75	51.96
CDY19270	Canola	cytosol, plastid	47.75	51.96
CDY37292	Canola	cytosol, plastid	47.75	51.96
VIT_07s0104g01390.t01	Wine grape	plasma membrane	47.75	51.96
AT4G15700.1	Thale cress	cytosol	46.85	50.98
AT5G18600.1	Thale cress	cytosol	46.85	50.98
Bra033503.1-P	Field mustard	cytosol	46.85	50.98
CDY32430	Canola	cytosol, plastid	46.85	50.98
CDY66333	Canola	cytosol	46.85	50.98
PGSC0003DMT400079099	Potato	cytosol	44.14	50.52
AT4G15680.1	Thale cress	cytosol	45.95	50.0
Bra001830.1-P	Field mustard	cytosol, plastid	45.95	50.0
Bra033504.1-P	Field mustard	cytosol	43.24	50.0
CDY48890	Canola	cytosol, plastid	45.95	50.0
PGSC0003DMT400058325	Potato	cytosol	45.95	50.0
Solyc06g054570.1.1	Tomato	cytosol	45.95	49.51
AT2G30540.1	Thale cress	cytosol	45.05	49.02
AT4G15660.1	Thale cress	cytosol, extracellular	45.05	49.02
AT4G15690.1	Thale cress	cytosol	45.05	49.02
Bra004424.1-P	Field mustard	cytosol	45.05	49.02
Bra033501.1-P	Field mustard	cytosol	45.05	49.02
CDX80139	Canola	cytosol	45.05	49.02
CDY53024	Canola	cytosol	45.05	49.02
PGSC0003DMT400029525	Potato	cytosol	45.05	49.02
Solyc01g067440.2.1	Tomato	cytosol	45.05	49.02
Solyc09g074590.1.1	Tomato	cytosol	45.05	49.02
AT1G06830.1	Thale cress	cytosol	43.24	48.48
Bra031540.1-P	Field mustard	cytosol	43.24	48.48
CDY06230	Canola	cytosol	43.24	48.48
CDY09953	Canola	cytosol	43.24	48.48
AT4G15670.1	Thale cress	cytosol	44.14	48.04
Bra021641.1-P	Field mustard	cytosol	44.14	48.04
CDY23990	Canola	cytosol	44.14	48.04
CDY29666	Canola	cytosol	44.14	48.04
CDY52638	Canola	cytosol	44.14	48.04
CDY54294	Canola	cytosol	44.14	48.04
CDY66332	Canola	cytosol	44.14	48.04
KRH31918	Soybean	cytosol	44.14	48.04
KRH71537	Soybean	cytosol	44.14	48.04
PGSC0003DMT400029597	Potato	cytosol	44.14	48.04
Solyc09g074600.1.1	Tomato	cytosol	44.14	48.04
Bra033499.1-P	Field mustard	cytosol	42.34	47.96
AT2G47870.1	Thale cress	cytosol	44.14	47.57
AT2G47880.1	Thale cress	cytosol	43.24	47.06
Bra012773.1-P	Field mustard	cytosol	43.24	47.06
Bra018307.1-P	Field mustard	cytosol	43.24	47.06
CDX84825	Canola	cytosol	43.24	47.06
CDX90576	Canola	cytosol	43.24	47.06
CDY09747	Canola	cytosol	43.24	47.06
CDY10745	Canola	cytosol	43.24	47.06
CDY22746	Canola	cytosol	43.24	47.06
CDY54296	Canola	cytosol	43.24	47.06
PGSC0003DMT400029596	Potato	cytosol	43.24	47.06
VIT_07s0104g01400.t01	Wine grape	cytosol	43.24	47.06
CDY27469	Canola	cytosol	44.14	46.67
CDY55528	Canola	cytosol	44.14	46.67
PGSC0003DMT400042706	Potato	cytosol	43.24	46.6
Bra038076.1-P	Field mustard	cytosol, extracellular	42.34	46.53
CDY09078	Canola	cytosol, extracellular	42.34	46.53
CDY22745	Canola	cytosol, extracellular	42.34	46.53
CDY10229	Canola	cytosol	41.44	46.46
CDY54881	Canola	cytosol	41.44	46.46
CDY69190	Canola	cytosol	43.24	46.15
AT3G62960.1	Thale cress	cytosol	42.34	46.08
Bra007718.1-P	Field mustard	cytosol	42.34	46.08
Bra038075.1-P	Field mustard	cytosol	42.34	46.08
CDX76678	Canola	cytosol	42.34	46.08
CDX97824	Canola	cytosol	42.34	46.08
CDY09079	Canola	cytosol	42.34	46.08
CDY11466	Canola	cytosol	42.34	46.08
KRG96387	Soybean	cytosol	42.34	46.08
KRH68127	Soybean	cytosol	42.34	46.08
PGSC0003DMT400041381	Potato	cytosol, plastid	42.34	46.08
Solyc06g008750.1.1	Tomato	cytosol	42.34	46.08
Solyc09g074580.1.1	Tomato	cytosol	42.34	46.08
Bra021444.1-P	Field mustard	cytosol	43.24	45.71
Solyc06g008760.1.1	Tomato	cytosol	41.44	45.54
Zm00001d016593_P001	Maize	cytosol	53.15	45.38
Bra014379.1-P	Field mustard	cytosol	41.44	45.1
CDX89162	Canola	cytosol	41.44	45.1
CDX95739	Canola	cytosol	41.44	45.1
CDY68061	Canola	cytosol	41.44	45.1
PGSC0003DMT400013649	Potato	cytosol	41.44	45.1
Bra003517.1-P	Field mustard	cytosol, extracellular	40.54	44.12
PGSC0003DMT400041380	Potato	cytosol, plastid	40.54	44.12
Solyc04g011790.1.1	Tomato	cytosol, plastid	40.54	44.12
Bra004426.1-P	Field mustard	cytosol	40.54	43.69
CDX80138	Canola	cytosol	40.54	43.69
AT1G03020.1	Thale cress	cytosol	39.64	43.14
Solyc04g011870.1.1	Tomato	cytosol, plastid	39.64	43.14
Zm00001d003927_P001	Maize	cytosol	53.15	43.07
Bra007717.1-P	Field mustard	cytosol	29.73	42.86
AT3G62950.1	Thale cress	cytosol	39.64	42.72
Bra014380.1-P	Field mustard	cytosol	39.64	42.72
CDX89161	Canola	cytosol	39.64	42.72
CDY53023	Canola	cytosol	39.64	42.72
Bra032563.1-P	Field mustard	cytosol	38.74	42.16
CDY32493	Canola	cytosol	38.74	42.16
KRH31917	Soybean	cytosol	38.74	42.16
KRH68129	Soybean	cytosol	38.74	42.16
KRH71538	Soybean	cytosol	38.74	42.16
PGSC0003DMT400027946	Potato	cytosol, plastid	38.74	42.16
PGSC0003DMT400041382	Potato	cytosol	38.74	42.16
Solyc04g011830.1.1	Tomato	cytosol, plastid	38.74	42.16
Solyc04g011840.1.1	Tomato	cytosol	38.74	42.16
Solyc04g011850.1.1	Tomato	cytosol	38.74	42.16
PGSC0003DMT400041379	Potato	cytosol, plastid	36.04	42.11
Solyc04g011820.1.1	Tomato	cytosol	36.04	42.11
CDX76677	Canola	cytosol	38.74	41.75
CDY11464	Canola	cytosol	38.74	41.75
CDY11465	Canola	cytosol	38.74	41.75
Solyc05g051720.1.1	Tomato	cytosol	38.74	41.35
Bra014382.1-P	Field mustard	cytosol	37.84	41.18
Bra033366.1-P	Field mustard	cytosol	37.84	41.18
CDX89159	Canola	cytosol	37.84	41.18
CDX89921	Canola	cytosol	37.84	41.18
CDX93949	Canola	cytosol	37.84	41.18
CDY18141	Canola	cytosol	37.84	41.18
KRG96389	Soybean	cytosol	37.84	41.18
PGSC0003DMT400027947	Potato	cytosol, plastid	37.84	41.18
PGSC0003DMT400027948	Potato	cytosol, plastid	37.84	41.18
PGSC0003DMT400027950	Potato	cytosol, plastid	37.84	41.18
PGSC0003DMT400027954	Potato	cytosol, plastid	37.84	41.18
PGSC0003DMT400041378	Potato	cytosol, plastid	37.84	41.18
PGSC0003DMT400042707	Potato	cytosol	37.84	41.18
Solyc04g011860.1.1	Tomato	cytosol, plastid	37.84	41.18
Solyc04g053110.1.1	Tomato	cytosol	37.84	41.18
PGSC0003DMT400027952	Potato	cytosol	35.14	41.05
PGSC0003DMT400027953	Potato	cytosol, plastid	36.94	40.59
Solyc09g074570.1.1	Tomato	cytosol	38.74	40.57
VIT_07s0104g01420.t01	Wine grape	cytosol	38.74	40.57
PGSC0003DMT400077394	Potato	cytosol	37.84	40.38
AT3G62930.1	Thale cress	cytosol	36.94	40.2
Bra003515.1-P	Field mustard	cytosol	36.94	40.2
CDX67910	Canola	cytosol	36.94	40.2
CDX76675	Canola	cytosol	36.94	40.2
PGSC0003DMT400027949	Potato	cytosol, plastid	36.94	40.2
PGSC0003DMT400027951	Potato	cytosol, plastid	36.94	40.2
Solyc04g011800.1.1	Tomato	cytosol, plastid	36.94	40.2
Solyc04g011810.1.1	Tomato	cytosol, plastid	36.94	40.2
KRH31916	Soybean	cytosol	34.23	40.0
Solyc05g051730.1.1	Tomato	cytosol	36.94	39.81
Bra007714.1-P	Field mustard	cytosol	36.04	39.22
CDY11462	Canola	cytosol	36.04	39.22
CDY25124	Canola	cytosol	36.04	39.22
PGSC0003DMT400077393	Potato	cytosol	36.04	38.84
PGSC0003DMT400029673	Potato	cytosol	36.94	38.68
Solyc04g011880.1.1	Tomato	cytosol, plastid	35.14	38.24
Solyc04g011780.1.1	Tomato	extracellular	34.23	37.25
KRH31915	Soybean	cytosol, plastid	35.14	37.14
KRH68130	Soybean	cytosol, plastid	35.14	37.14
KRG96390	Soybean	cytosol, plastid	33.33	35.24
Zm00001d018802_P001	Maize	cytosol	47.75	33.33
Bra015532.1-P	Field mustard	cytosol	36.94	28.28
CDY71728	Canola	cytosol	36.04	28.17
CDX97821	Canola	mitochondrion	31.53	26.32
PGSC0003DMT400013650	Potato	cytosol	32.43	12.2

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	ProteinID:AQK48684.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:K7UP91	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF72	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000220EB32	EnsemblPlantsGene:Zm00001d048720
EnsemblPlants:Zm00001d048720_P001	EnsemblPlants:Zm00001d048720_T001	SEG:seg	:	:	:

Description

Glutaredoxin-C13

Coordinates

chr4:-:4181912..4182247

Molecular Weight (calculated)

11586.1 Da

IEP (calculated)

7.622

GRAVY (calculated)

0.174

Length

111 amino acids

Sequence
(BLAST)

001: MDHVARLASE RAVVVFTASN CSMGDVVTSL LSSLGVNAAV HDLDRDPRGM EMERELARRL GGGGGRGTTT TPTVPAVFVG GDLVGGTNRV MALHLSGELV
101: PMLRKAGALW L

Best Arabidopsis Sequence Match ( AT4G15700.1 )
(BLAST)

001: MENLQKMISE KSVVIFSKNS CCMSHTIKTL FLDLGVNPTI YELDEISRGK EIEHALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRAGAL
101: WL

Arabidopsis Description

GRXS3Monothiol glutaredoxin-S3 [Source:UniProtKB/Swiss-Prot;Acc:O23421]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.