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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 3
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc02g086840.2.1
Solyc03g096650.1.1
Solyc06g065650.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 Solyc03g096650.1.1 AT2G29310.1 21798944
AT2G30540.1 Solyc02g086840.2.1 AT3G27960.1 21798944
AT2G30540.1 Solyc06g065650.2.1 AT4G32570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_07s0104g01390.t01 Wine grape plasma membrane 71.29 70.59
KRG96386 Soybean cytosol 69.31 69.31
KRH68125 Soybean cytosol 69.31 69.31
KRH31919 Soybean cytosol, plasma membrane 68.32 68.32
Bra031540.1-P Field mustard cytosol 66.34 67.68
CDY06230 Canola cytosol 66.34 67.68
CDY09953 Canola cytosol 66.34 67.68
CDY10229 Canola cytosol 66.34 67.68
CDY54881 Canola cytosol 66.34 67.68
KRH71536 Soybean extracellular 67.33 67.33
AT1G06830.1 Thale cress cytosol 65.35 66.67
AT2G47880.1 Thale cress cytosol 67.33 66.67
Bra004424.1-P Field mustard cytosol 67.33 66.67
CDX80139 Canola cytosol 67.33 66.67
CDY53024 Canola cytosol 67.33 66.67
AT3G62960.1 Thale cress cytosol 66.34 65.69
Bra014379.1-P Field mustard cytosol 66.34 65.69
CDX89162 Canola cytosol 66.34 65.69
CDY68061 Canola cytosol 66.34 65.69
Solyc09g074570.1.1 Tomato cytosol 68.32 65.09
Bra003517.1-P Field mustard cytosol, extracellular 65.35 64.71
Bra007718.1-P Field mustard cytosol 65.35 64.71
CDX95739 Canola cytosol 65.35 64.71
CDY11466 Canola cytosol 65.35 64.71
CDY27469 Canola cytosol 66.34 63.81
CDY55528 Canola cytosol 66.34 63.81
AT2G30540.1 Thale cress cytosol 64.36 63.73
CDX76678 Canola cytosol 64.36 63.73
CDX84825 Canola cytosol 64.36 63.73
CDY23990 Canola cytosol 64.36 63.73
Bra021444.1-P Field mustard cytosol 65.35 62.86
Bra021641.1-P Field mustard cytosol 62.38 61.76
CDY29666 Canola cytosol 62.38 61.76
CDY52638 Canola cytosol 62.38 61.76
Bra018307.1-P Field mustard cytosol 61.39 60.78
CDY10745 Canola cytosol 61.39 60.78
CDX97824 Canola cytosol 60.4 59.8
TraesCS5B01G049000.1 Wheat cytosol 48.51 56.98
GSMUA_Achr1P26720_001 Banana cytosol 56.44 55.34
TraesCS5B01G100900.1 Wheat cytosol 56.44 55.34
Zm00001d040837_P001 Maize cytosol 56.44 55.34
EES00745 Sorghum cytosol 55.45 54.37
EES00746 Sorghum cytosol 55.45 54.37
GSMUA_Achr11P... Banana cytosol, extracellular 55.45 54.37
Os01t0368900-01 Rice cytosol 55.45 54.37
TraesCS5A01G094700.1 Wheat cytosol 55.45 54.37
TraesCS5D01G107200.1 Wheat cytosol 55.45 54.37
EES02025 Sorghum cytosol 57.43 54.21
Solyc01g067460.1.1 Tomato cytosol 54.46 53.92
Zm00001d027695_P001 Maize cytosol 55.45 53.85
GSMUA_Achr11P... Banana cytosol 54.46 53.4
Os12t0538600-00 Rice cytosol, extracellular 54.46 53.4
TraesCS5D01G054000.1 Wheat cytosol 54.46 53.4
HORVU5Hr1G025610.1 Barley cytosol 54.46 52.88
Zm00001d023873_P001 Maize cytosol 54.46 52.88
GSMUA_Achr8P09970_001 Banana cytosol 53.47 52.43
GSMUA_Achr8P33660_001 Banana cytosol 53.47 52.43
HORVU5Hr1G025680.1 Barley cytosol 53.47 52.43
TraesCS5A01G044100.1 Wheat cytosol 53.47 52.43
TraesCS5B01G048300.1 Wheat cytosol 53.47 52.43
TraesCS5B01G101100.1 Wheat cytosol, extracellular 53.47 52.43
Zm00001d040836_P001 Maize cytosol 53.47 52.43
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 53.47 51.92
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 53.47 51.92
TraesCS5A01G094500.1 Wheat cytosol 53.47 51.92
TraesCS5A01G094600.1 Wheat cytosol 53.47 51.92
TraesCS5B01G100600.1 Wheat cytosol 53.47 51.92
TraesCS5B01G100700.1 Wheat cytosol 53.47 51.92
TraesCS5D01G106800.1 Wheat cytosol 53.47 51.92
Zm00001d023870_P001 Maize cytosol, extracellular 53.47 51.92
GSMUA_Achr11P... Banana cytosol, extracellular 52.48 51.46
HORVU5Hr1G010960.1 Barley cytosol 52.48 51.46
TraesCS5A01G094900.1 Wheat extracellular 52.48 51.46
TraesCS5B01G048400.1 Wheat cytosol 52.48 51.46
TraesCS5B01G048600.1 Wheat cytosol 52.48 51.46
TraesCS5B01G101600.1 Wheat cytosol, extracellular 52.48 51.46
TraesCS5D01G054200.1 Wheat cytosol 52.48 51.46
TraesCS5D01G107300.1 Wheat cytosol 52.48 51.46
TraesCS5D01G107500.1 Wheat cytosol, extracellular 52.48 51.46
TraesCS5D01G108100.1 Wheat cytosol, extracellular 52.48 51.46
EES16092 Sorghum cytosol 53.47 51.43
HORVU5Hr1G033140.1 Barley cytosol 53.47 51.43
Zm00001d042187_P001 Maize cytosol 56.44 51.35
TraesCS3A01G462200.1 Wheat cytosol 52.48 50.96
TraesCS3A01G463000.1 Wheat cytosol 52.48 50.96
TraesCS3B01G504700.1 Wheat cytosol 52.48 50.96
TraesCS3D01G456900.1 Wheat cytosol 52.48 50.96
TraesCS5D01G106900.1 Wheat cytosol 52.48 50.96
Zm00001d023869_P001 Maize cytosol 52.48 50.96
HORVU3Hr1G099150.1 Barley cytosol, extracellular 32.67 50.77
GSMUA_Achr7P03690_001 Banana cytosol 51.49 50.49
HORVU5Hr1G025710.1 Barley cytosol, extracellular 51.49 50.49
TraesCS5A01G044400.1 Wheat cytosol 51.49 50.49
TraesCS5A01G044700.1 Wheat cytosol 51.49 50.49
TraesCS5A01G044900.1 Wheat cytosol 51.49 50.49
TraesCS5A01G095500.1 Wheat cytosol 51.49 50.49
TraesCS5B01G048900.1 Wheat cytosol 51.49 50.49
TraesCS5B01G049200.1 Wheat cytosol 51.49 50.49
TraesCS5B01G101000.1 Wheat cytosol 51.49 50.49
TraesCS5D01G054400.1 Wheat cytosol 51.49 50.49
TraesCS5D01G054800.1 Wheat cytosol 51.49 50.49
TraesCS5D01G054900.1 Wheat cytosol 51.49 50.49
TraesCS5D01G055000.1 Wheat cytosol 51.49 50.49
EES16093 Sorghum cytosol 52.48 50.48
Os11t0656000-00 Rice cytosol, plastid 54.46 50.46
HORVU3Hr1G099090.1 Barley cytosol 51.49 50.0
Os12t0538700-01 Rice cytosol 51.49 50.0
Solyc01g067440.2.1 Tomato cytosol 50.49 50.0
TraesCS3A01G463200.1 Wheat cytosol 51.49 50.0
TraesCS3B01G506200.1 Wheat cytosol 51.49 50.0
TraesCS3B01G506500.1 Wheat cytosol 51.49 50.0
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 51.49 50.0
Zm00001d023872_P001 Maize cytosol, mitochondrion 51.49 49.52
GSMUA_Achr5P00380_001 Banana extracellular 50.49 49.51
GSMUA_AchrUn_... Banana cytosol, extracellular 50.49 49.51
HORVU5Hr1G010870.1 Barley cytosol 50.49 49.51
TraesCS5A01G045000.1 Wheat cytosol 50.49 49.51
TraesCS5A01G094800.1 Wheat cytosol 50.49 49.51
TraesCS5B01G049100.1 Wheat cytosol 50.49 49.51
TraesCS3A01G462900.1 Wheat cytosol, extracellular 50.49 49.04
TraesCS3B01G505300.1 Wheat cytosol 50.49 49.04
TraesCS3D01G457200.1 Wheat cytosol 50.49 49.04
Os11t0656700-00 Rice cytosol, plastid 52.48 48.62
OQU79243 Sorghum cytosol 51.49 48.6
TraesCS5A01G044800.1 Wheat cytosol 49.51 48.54
TraesCS5D01G055100.1 Wheat cytosol 49.51 48.54
TraesCS3B01G506400.1 Wheat cytosol 49.51 48.08
Os11t0656400-00 Rice cytosol, plastid 51.49 47.71
EES16097 Sorghum cytosol 50.49 47.66
GSMUA_Achr5P00370_001 Banana cytosol 48.51 47.57
HORVU5Hr1G010950.1 Barley cytosol 48.51 47.57
Solyc04g011820.1.1 Tomato cytosol 44.55 47.37
HORVU5Hr1G025690.1 Barley cytosol 52.48 47.32
EES17138 Sorghum cytosol 49.51 47.17
Solyc06g008750.1.1 Tomato cytosol 47.52 47.06
Solyc09g074580.1.1 Tomato cytosol 47.52 47.06
EES16096 Sorghum cytosol 48.51 46.67
Solyc05g051730.1.1 Tomato cytosol 47.52 46.6
Os05t0149950-00 Rice cytosol, mitochondrion 52.48 46.49
HORVU3Hr1G099050.2 Barley cytosol 49.51 46.3
Solyc06g054570.1.1 Tomato cytosol 46.53 45.63
Solyc05g051720.1.1 Tomato cytosol 46.53 45.19
Solyc04g011790.1.1 Tomato cytosol, plastid 45.54 45.1
Solyc04g053110.1.1 Tomato cytosol 45.54 45.1
Os11t0655900-01 Rice extracellular 47.52 44.44
TraesCS4D01G147300.1 Wheat cytosol 45.54 44.23
Solyc04g011850.1.1 Tomato cytosol 44.55 44.12
Solyc04g011860.1.1 Tomato cytosol, plastid 44.55 44.12
Solyc04g011870.1.1 Tomato cytosol, plastid 44.55 44.12
Os01t0936000-00 Rice cytosol 53.47 43.2
Solyc04g011810.1.1 Tomato cytosol, plastid 43.56 43.14
Solyc04g011830.1.1 Tomato cytosol, plastid 43.56 43.14
Solyc04g011880.1.1 Tomato cytosol, plastid 43.56 43.14
TraesCS3B01G506000.1 Wheat mitochondrion 34.65 42.68
Solyc04g011800.1.1 Tomato cytosol, plastid 42.57 42.16
Solyc04g011840.1.1 Tomato cytosol 42.57 42.16
Bra015532.1-P Field mustard cytosol 60.4 42.07
Zm00001d048719_P001 Maize cytosol 45.54 41.82
TraesCS3A01G462800.1 Wheat extracellular 33.66 41.46
Zm00001d048720_P001 Maize cytosol 45.54 41.44
Solyc09g074590.1.1 Tomato cytosol 41.58 41.18
Solyc04g011780.1.1 Tomato extracellular 40.59 40.2
Solyc09g074600.1.1 Tomato cytosol 40.59 40.2
EES08918 Sorghum cytosol, plastid 41.58 40.0
HORVU5Hr1G025560.1 Barley cytosol 53.47 39.71
Solyc01g009900.2.1 Tomato cytosol, plastid 46.53 39.17
Solyc01g009910.1.1 Tomato mitochondrion, plastid 46.53 39.17
Solyc05g015910.1.1 Tomato cytosol 50.49 38.93
Solyc01g009890.1.1 Tomato cytosol, plastid 48.51 37.69
EES08919 Sorghum cytosol 40.59 37.61
CDY71728 Canola cytosol 52.48 37.32
HORVU0Hr1G010190.2 Barley cytosol 34.65 33.33
Solyc08g036570.1.1 Tomato cytosol 38.61 30.95
CDX97821 Canola mitochondrion 38.61 29.32
PGSC0003DMT400013650 Potato cytosol 69.31 23.73
Protein Annotations
MapMan:18.8.2MapMan:25.1.1.3Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005623GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987
GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2
InterPro:GlutaredoxinInterPro:Glutaredoxin_subgrInterPro:IPR002109UniProt:K4C3Q6PFAM:PF00462PRINTS:PR00160
PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF57SUPFAM:SSF52833EnsemblPlantsGene:Solyc06g008760.1EnsemblPlants:Solyc06g008760.1.1
TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI000276691B:::
Description
No Description!
Coordinates
chr6:+:2680655..2680960
Molecular Weight (calculated)
11116.7 Da
IEP (calculated)
6.496
GRAVY (calculated)
0.143
Length
101 amino acids
Sequence
(BLAST)
001: MADKVQRMSS EHGVMIFSKS TCCLCYAVTI LFRDLGVDPY VHELDHDSEG KDMEKALVRM GCNVSVPAVF IGGKLVGSTN EVMSLHLKGS LIQLLKPYLP
101: D
Best Arabidopsis Sequence Match ( AT2G47880.1 )
(BLAST)
001: MDKVMRMSSE KGVVIFTKSS CCLCYAVQIL FRDLRVQPTI HEIDNDPDCR EIEKALLRLG CSTAVPAVFV GGKLVGSTNE VMSLHLSGSL VPLIKPYQSI
101: LY
Arabidopsis Description
GRXC13Glutaredoxin-C13 [Source:UniProtKB/Swiss-Prot;Acc:O82255]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.