Factsheet for TraesCS5D01G107300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G284200.2
TraesCS2A01G504600.1
TraesCS2B01G301100.1
TraesCS2D01G283100.2
TraesCS2D01G505300.1
TraesCS3A01G435100.1
TraesCS3A01G536400.1
TraesCS3B01G470100.1
TraesCS3B01G607500.1
TraesCS3D01G541800.1
TraesCS4B01G319100.1
TraesCS4D01G315600.1
TraesCS5A01G493100.1
TraesCS6A01G274500.1
TraesCS6A01G324500.1
TraesCS6A01G412800.1
TraesCS6B01G302000.1
TraesCS6B01G354900.3
TraesCS6B01G462100.1
TraesCS6D01G254800.1
TraesCS6D01G304300.1
TraesCS6D01G397000.1
TraesCS7A01G167900.1
TraesCS7B01G072700.1
TraesCS7D01G168700.1
TraesCSU01G150000.1
TraesCSU01G244000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT4G15700.1	TraesCS2A01G504600.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS2D01G505300.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS6A01G324500.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS6B01G354900.3	AT1G73360.1	21798944
AT4G15700.1	TraesCS6D01G304300.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7A01G167900.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7B01G072700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7D01G168700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G150000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G244000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS6A01G412800.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6B01G462100.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6D01G397000.1	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G101000.1	Wheat	cytosol	98.06	98.06
TraesCS5A01G094800.1	Wheat	cytosol	96.12	96.12
HORVU5Hr1G025690.1	Barley	cytosol	97.09	89.29
TraesCS5D01G106800.1	Wheat	cytosol	88.35	87.5
Os12t0538700-01	Rice	cytosol	86.41	85.58
Zm00001d023869_P001	Maize	cytosol	82.52	81.73
EES16093	Sorghum	cytosol	81.55	80.0
EES17138	Sorghum	cytosol	79.61	77.36
TraesCS4D01G147300.1	Wheat	cytosol	75.73	75.0
Zm00001d023872_P001	Maize	cytosol, mitochondrion	72.82	71.43
TraesCS3D01G456900.1	Wheat	cytosol	67.96	67.31
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	66.99	66.99
TraesCS5D01G106900.1	Wheat	cytosol	66.99	66.35
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	66.02	66.02
TraesCS5D01G054800.1	Wheat	cytosol	64.08	64.08
TraesCS3D01G455600.1	Wheat	cytosol, mitochondrion	64.08	63.46
TraesCS3D01G456000.1	Wheat	cytosol, mitochondrion	64.08	63.46
GSMUA_Achr8P09970_001	Banana	cytosol	63.11	63.11
TraesCS5D01G054000.1	Wheat	cytosol	63.11	63.11
TraesCS5D01G054900.1	Wheat	cytosol	63.11	63.11
TraesCS5D01G107200.1	Wheat	cytosol	63.11	63.11
TraesCS3D01G457200.1	Wheat	cytosol	63.11	62.5
TraesCS5D01G054200.1	Wheat	cytosol	62.14	62.14
TraesCS5D01G055000.1	Wheat	cytosol	62.14	62.14
TraesCS5D01G055100.1	Wheat	cytosol	62.14	62.14
VIT_05s0020g01760.t01	Wine grape	cytosol	61.16	61.76
GSMUA_Achr11P...	Banana	cytosol, extracellular	61.16	61.16
KRH11238	Soybean	cytosol	60.19	60.78
KRH21035	Soybean	cytosol	60.19	60.78
TraesCS5D01G054400.1	Wheat	cytosol	60.19	60.19
KRH02215	Soybean	cytosol	59.22	59.8
KRH50911	Soybean	cytosol	59.22	59.8
AT2G47870.1	Thale cress	cytosol	59.22	59.22
KRH31918	Soybean	cytosol	58.25	58.82
KRH71537	Soybean	cytosol	58.25	58.82
Solyc01g067440.2.1	Tomato	cytosol	58.25	58.82
Solyc01g067460.1.1	Tomato	cytosol	58.25	58.82
KRH68125	Soybean	cytosol	57.28	58.42
PGSC0003DMT400058325	Potato	cytosol	57.28	57.84
PGSC0003DMT400058374	Potato	cytosol	57.28	57.84
KRG96386	Soybean	cytosol	56.31	57.43
KRH11237	Soybean	cytosol	56.31	56.86
Bra031540.1-P	Field mustard	cytosol	54.37	56.57
CDY06230	Canola	cytosol	54.37	56.57
CDY09953	Canola	cytosol	54.37	56.57
KRH71536	Soybean	extracellular	55.34	56.44
CDY53023	Canola	cytosol	56.31	56.31
VIT_05s0020g01750.t01	Wine grape	cytosol	56.31	56.31
Bra023688.1-P	Field mustard	cytosol	55.34	55.88
CDY68328	Canola	cytosol	55.34	55.88
KRH21036	Soybean	cytosol	55.34	55.88
KRH50912	Soybean	cytosol	55.34	55.88
VIT_07s0104g01390.t01	Wine grape	plasma membrane	55.34	55.88
AT1G06830.1	Thale cress	cytosol	53.4	55.56
KRH31919	Soybean	cytosol, plasma membrane	54.37	55.45
Bra004426.1-P	Field mustard	cytosol	55.34	55.34
CDX80138	Canola	cytosol	55.34	55.34
AT2G30540.1	Thale cress	cytosol	54.37	54.9
AT4G15700.1	Thale cress	cytosol	54.37	54.9
Bra002171.1-P	Field mustard	cytosol	54.37	54.9
Bra006467.1-P	Field mustard	cytosol	54.37	54.9
CDX70828	Canola	cytosol	54.37	54.9
CDX88929	Canola	cytosol	54.37	54.9
CDX92597	Canola	cytosol	54.37	54.9
CDY02610	Canola	cytosol	54.37	54.9
CDY32430	Canola	cytosol, plastid	54.37	54.9
PGSC0003DMT400079099	Potato	cytosol	51.46	54.64
CDY10229	Canola	cytosol	52.43	54.55
CDY54881	Canola	cytosol	52.43	54.55
AT3G62950.1	Thale cress	cytosol	54.37	54.37
Bra014380.1-P	Field mustard	cytosol	54.37	54.37
CDX89161	Canola	cytosol	54.37	54.37
Solyc06g054570.1.1	Tomato	cytosol	54.37	54.37
AT3G21460.1	Thale cress	mitochondrion	53.4	53.92
AT4G15690.1	Thale cress	cytosol	53.4	53.92
Bra001830.1-P	Field mustard	cytosol, plastid	53.4	53.92
Bra021641.1-P	Field mustard	cytosol	53.4	53.92
CDY13904	Canola	cytosol	53.4	53.92
CDY23990	Canola	cytosol	53.4	53.92
CDY29666	Canola	cytosol	53.4	53.92
CDY48890	Canola	cytosol, plastid	53.4	53.92
CDY52638	Canola	cytosol	53.4	53.92
KRG96387	Soybean	cytosol	53.4	53.92
KRH68127	Soybean	cytosol	53.4	53.92
Solyc06g008750.1.1	Tomato	cytosol	53.4	53.92
VIT_07s0104g01400.t01	Wine grape	cytosol	53.4	53.92
Bra007717.1-P	Field mustard	cytosol	39.81	53.25
Bra033504.1-P	Field mustard	cytosol	49.51	53.12
AT4G15660.1	Thale cress	cytosol, extracellular	52.43	52.94
Bra001831.1-P	Field mustard	cytosol	52.43	52.94
Bra018307.1-P	Field mustard	cytosol	52.43	52.94
Bra023883.1-P	Field mustard	cytosol, plastid	52.43	52.94
Bra033503.1-P	Field mustard	cytosol	52.43	52.94
CDX84825	Canola	cytosol	52.43	52.94
CDX97824	Canola	cytosol	52.43	52.94
CDY10745	Canola	cytosol	52.43	52.94
CDY19270	Canola	cytosol, plastid	52.43	52.94
CDY32431	Canola	cytosol	52.43	52.94
CDY37292	Canola	cytosol, plastid	52.43	52.94
CDY48891	Canola	cytosol	52.43	52.94
CDY66332	Canola	cytosol	52.43	52.94
CDY66333	Canola	cytosol	52.43	52.94
PGSC0003DMT400013649	Potato	cytosol	52.43	52.94
PGSC0003DMT400029596	Potato	cytosol	52.43	52.94
Solyc06g008760.1.1	Tomato	cytosol	51.46	52.48
CDX76677	Canola	cytosol	52.43	52.43
CDY11464	Canola	cytosol	52.43	52.43
CDY11465	Canola	cytosol	52.43	52.43
PGSC0003DMT400042706	Potato	cytosol	52.43	52.43
AT4G15670.1	Thale cress	cytosol	51.46	51.96
AT4G15680.1	Thale cress	cytosol	51.46	51.96
AT5G18600.1	Thale cress	cytosol	51.46	51.96
Bra033501.1-P	Field mustard	cytosol	51.46	51.96
CDY54294	Canola	cytosol	51.46	51.96
CDY54296	Canola	cytosol	51.46	51.96
Solyc09g074580.1.1	Tomato	cytosol	51.46	51.96
AT2G47880.1	Thale cress	cytosol	50.49	50.98
Bra012773.1-P	Field mustard	cytosol	50.49	50.98
CDX90576	Canola	cytosol	50.49	50.98
CDX95739	Canola	cytosol	50.49	50.98
CDY09747	Canola	cytosol	50.49	50.98
CDY22746	Canola	cytosol	50.49	50.98
PGSC0003DMT400041381	Potato	cytosol, plastid	50.49	50.98
Bra038076.1-P	Field mustard	cytosol, extracellular	49.51	50.49
CDY09078	Canola	cytosol, extracellular	49.51	50.49
CDY22745	Canola	cytosol, extracellular	49.51	50.49
AT3G62960.1	Thale cress	cytosol	49.51	50.0
Bra004424.1-P	Field mustard	cytosol	49.51	50.0
Bra007718.1-P	Field mustard	cytosol	49.51	50.0
Bra038075.1-P	Field mustard	cytosol	49.51	50.0
CDX76678	Canola	cytosol	49.51	50.0
CDX80139	Canola	cytosol	49.51	50.0
CDY09079	Canola	cytosol	49.51	50.0
CDY11466	Canola	cytosol	49.51	50.0
CDY53024	Canola	cytosol	49.51	50.0
PGSC0003DMT400029525	Potato	cytosol	49.51	50.0
Solyc09g074590.1.1	Tomato	cytosol	49.51	50.0
CDY27469	Canola	cytosol	50.49	49.52
CDY55528	Canola	cytosol	50.49	49.52
CDY69190	Canola	cytosol	49.51	49.04
Bra014379.1-P	Field mustard	cytosol	48.54	49.02
CDX89162	Canola	cytosol	48.54	49.02
CDY68061	Canola	cytosol	48.54	49.02
PGSC0003DMT400029597	Potato	cytosol	48.54	49.02
PGSC0003DMT400041380	Potato	cytosol, plastid	48.54	49.02
Solyc04g011790.1.1	Tomato	cytosol, plastid	48.54	49.02
Solyc09g074600.1.1	Tomato	cytosol	48.54	49.02
Bra033499.1-P	Field mustard	cytosol	46.6	48.98
Bra021444.1-P	Field mustard	cytosol	49.51	48.57
Solyc04g011870.1.1	Tomato	cytosol, plastid	47.57	48.04
Bra003517.1-P	Field mustard	cytosol, extracellular	46.6	47.06
KRH68129	Soybean	cytosol	46.6	47.06
PGSC0003DMT400027946	Potato	cytosol, plastid	46.6	47.06
PGSC0003DMT400041382	Potato	cytosol	46.6	47.06
Solyc04g011830.1.1	Tomato	cytosol, plastid	46.6	47.06
Solyc04g011840.1.1	Tomato	cytosol	46.6	47.06
Solyc04g011850.1.1	Tomato	cytosol	46.6	47.06
PGSC0003DMT400027953	Potato	cytosol, plastid	45.63	46.53
PGSC0003DMT400041379	Potato	cytosol, plastid	42.72	46.32
Solyc04g011820.1.1	Tomato	cytosol	42.72	46.32
VIT_07s0104g01420.t01	Wine grape	cytosol	47.57	46.23
AT1G03020.1	Thale cress	cytosol	45.63	46.08
Bra003515.1-P	Field mustard	cytosol	45.63	46.08
CDX67910	Canola	cytosol	45.63	46.08
KRG96389	Soybean	cytosol	45.63	46.08
PGSC0003DMT400027948	Potato	cytosol, plastid	45.63	46.08
PGSC0003DMT400027950	Potato	cytosol, plastid	45.63	46.08
Solyc04g011860.1.1	Tomato	cytosol, plastid	45.63	46.08
PGSC0003DMT400027952	Potato	cytosol	41.75	45.26
Solyc05g051720.1.1	Tomato	cytosol	45.63	45.19
Bra032563.1-P	Field mustard	cytosol	44.66	45.1
CDY32493	Canola	cytosol	44.66	45.1
KRH31917	Soybean	cytosol	44.66	45.1
PGSC0003DMT400027947	Potato	cytosol, plastid	44.66	45.1
PGSC0003DMT400027949	Potato	cytosol, plastid	44.66	45.1
PGSC0003DMT400027951	Potato	cytosol, plastid	44.66	45.1
PGSC0003DMT400027954	Potato	cytosol, plastid	44.66	45.1
PGSC0003DMT400041378	Potato	cytosol, plastid	44.66	45.1
Solyc04g011800.1.1	Tomato	cytosol, plastid	44.66	45.1
Solyc04g011810.1.1	Tomato	cytosol, plastid	44.66	45.1
TraesCS2D01G284300.1	Wheat	cytosol, extracellular	58.25	44.78
KRH68130	Soybean	cytosol, plastid	45.63	44.76
PGSC0003DMT400077394	Potato	cytosol	44.66	44.23
KRH31916	Soybean	cytosol	40.78	44.21
AT3G62930.1	Thale cress	cytosol	43.69	44.12
Bra014382.1-P	Field mustard	cytosol	43.69	44.12
Bra033366.1-P	Field mustard	cytosol	43.69	44.12
CDX89159	Canola	cytosol	43.69	44.12
CDX89921	Canola	cytosol	43.69	44.12
CDX93949	Canola	cytosol	43.69	44.12
CDY25124	Canola	cytosol	43.69	44.12
KRH71538	Soybean	cytosol	43.69	44.12
Solyc04g053110.1.1	Tomato	cytosol	43.69	44.12
Solyc05g051730.1.1	Tomato	cytosol	43.69	43.69
PGSC0003DMT400029673	Potato	cytosol	44.66	43.4
CDY18141	Canola	cytosol	42.72	43.14
PGSC0003DMT400042707	Potato	cytosol	42.72	43.14
Solyc04g011780.1.1	Tomato	extracellular	42.72	43.14
KRG96390	Soybean	cytosol, plastid	43.69	42.86
PGSC0003DMT400077393	Potato	cytosol	42.72	42.72
Bra007714.1-P	Field mustard	cytosol	41.75	42.16
CDX76675	Canola	cytosol	41.75	42.16
CDY11462	Canola	cytosol	41.75	42.16
Solyc04g011880.1.1	Tomato	cytosol, plastid	40.78	41.18
KRH31915	Soybean	cytosol, plastid	41.75	40.95
Solyc09g074570.1.1	Tomato	cytosol	41.75	40.57
TraesCS2D01G252500.1	Wheat	cytosol	48.54	36.5
Bra015532.1-P	Field mustard	cytosol	47.57	33.79
CDY71728	Canola	cytosol	43.69	31.69
CDX97821	Canola	mitochondrion	39.81	30.83
PGSC0003DMT400013650	Potato	cytosol	38.84	13.56

Protein Annotations

EnsemblPlants:TraesCS5D01G107300.1	EnsemblPlantsGene:TraesCS5D01G107300	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:Thioredoxin-like_sf	PANTHER:PTHR10168	PANTHER:PTHR10168:SF83	PFAM:PF00462
PFscan:PS51354	SUPFAM:SSF52833	TIGR:cd03419	TIGRFAMs:TIGR02189	MapMan:18.8.2	:

Description

No Description!

Coordinates

chr5D:-:120896949..120897260

Molecular Weight (calculated)

11078.7 Da

IEP (calculated)

10.762

GRAVY (calculated)

0.118

Length

103 amino acids

Sequence
(BLAST)

001: MERVTKLSSE KAVVIFTTSN CPMSHSVTSL FSSLGVGAAV HELDKDPRGR DMERDLARRL GRTPPVPAVF IGGKLVGSTD RVMSLHLSGK LVVMLKAAGA
101: MWL

Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)

001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL

Arabidopsis Description

GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.