Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G274500.1 | Wheat | cytosol | 99.44 | 99.58 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 99.44 | 99.44 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 98.31 | 98.59 |
| Os02t0708400-01 | Rice | plasma membrane | 90.7 | 90.58 |
| EES05647 | Sorghum | cytosol | 90.0 | 89.62 |
| Zm00001d051589_P001 | Maize | cytosol | 88.73 | 88.36 |
| Zm00001d017793_P001 | Maize | cytosol | 87.04 | 86.68 |
| GSMUA_Achr10P... | Banana | cytosol | 70.0 | 75.3 |
| GSMUA_Achr2P09630_001 | Banana | nucleus | 66.9 | 66.43 |
| VIT_17s0000g08260.t01 | Wine grape | cytosol | 66.76 | 64.23 |
| Solyc03g114320.2.1 | Tomato | cytosol | 64.79 | 63.01 |
| PGSC0003DMT400062960 | Potato | cytosol | 64.79 | 63.01 |
| VIT_14s0066g01280.t01 | Wine grape | cytosol | 57.89 | 61.34 |
| KRG93305 | Soybean | cytosol | 59.44 | 60.29 |
| KRH63534 | Soybean | nucleus | 61.55 | 60.19 |
| KRH56614 | Soybean | cytosol | 59.44 | 60.11 |
| Bra025315.1-P | Field mustard | cytosol | 54.37 | 58.13 |
| CDX86457 | Canola | cytosol | 54.37 | 58.13 |
| CDY58518 | Canola | cytosol | 53.52 | 57.84 |
| AT3G27960.1 | Thale cress | cytosol | 53.8 | 57.62 |
| KRH54405 | Soybean | cytosol | 60.42 | 56.97 |
| PGSC0003DMT400001405 | Potato | cytosol | 56.9 | 56.42 |
| Solyc02g086840.2.1 | Tomato | cytosol | 56.34 | 56.26 |
| AT1G27500.2 | Thale cress | cytosol | 52.11 | 55.98 |
| Bra032832.1-P | Field mustard | nucleus | 51.13 | 55.08 |
| CDY27619 | Canola | nucleus | 51.13 | 55.08 |
| CDX90092 | Canola | cytosol, mitochondrion | 9.58 | 54.4 |
| TraesCS6B01G037200.1 | Wheat | plastid | 46.2 | 53.86 |
| KRH57064 | Soybean | cytosol | 52.96 | 51.51 |
| CDY56191 | Canola | cytosol | 51.55 | 51.4 |
| KRH03299 | Soybean | cytosol | 26.34 | 46.87 |
| TraesCS6B01G437800.1 | Wheat | mitochondrion | 18.31 | 21.07 |
| TraesCS4B01G316500.2 | Wheat | mitochondrion | 15.49 | 15.51 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G302000.1 | EnsemblPlantsGene:TraesCS6B01G302000 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| ncoils:Coil | PANTHER:PTHR19959 | PANTHER:PTHR19959:SF156 | PFAM:PF13176 | PFAM:PF13424 | PFscan:PS50005 |
| PFscan:PS50293 | SEG:seg | SMART:SM00028 | SUPFAM:SSF48452 | MapMan:21.1.1.4.3 | : |
Description
No Description!
Coordinates
chr6B:-:541157256..541160280
Molecular Weight (calculated)
77181.0 Da
IEP (calculated)
4.828
GRAVY (calculated)
-0.489
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGIIVDGVV TEEIQHEVGS SQNKENLTAP TMAPSMQSET LEMHVENSGA GEPSIEQLYN NVCEMESSSE GGGSPSRESF GSDGEESRID SELRHLVAGE
101: MEAMKVIEEE EEKEKEKGSG SVTNAVPTAG NGTPVRPQSS NSSKKKATKS QLESDASVGP NGKASPEEGE SEVSKPGSRV GRRRKASAKS QNGTEDAGLD
201: NPDLGPFLLK HARDLIASDN PRRALKYALR ATKSFEKCAG GKPSLNLVMS LHVVAAIHCN MGKYEEAVPV LQRSLEIPVT EEGQEHALAK FSGCMQLGDT
301: YGMLGQIALS LQWYAKGLEI QKQTLGEQDP RVGETCRYLA EAHVQALQLD EAQKLCQMAL DIHRDNGQPA SLEETADRRL MGLICDTKGD HEAALEHLVM
401: ASMAMVANGQ ETEVASVDCS IGDIYLSLGR YDEAVCAYQK ALTVFKTSKG ENHATVASVF LRLADLYNKT GKLRESKSYC ENALKIYQKP IPGTSLEEIA
501: TGLTDVSAIY ETMNEHDQAL KLLQKALKMY NNSAGQQSTI AGIEAQIGVL HYISGNYGDA YDSFKSAITK LRTCGEKKSA FFGIALNQMG LACVQRYSIN
601: EAAELFEEAR TVLEQEYGPY HADTLGVYSN LAGTYDAMGR LDEAIEILEY VVEMREEKLG TANPDVDDEK RRLAELLKEA GRGRSRKAKS LENLLETNPY
701: TIGKRTTVAA
101: MEAMKVIEEE EEKEKEKGSG SVTNAVPTAG NGTPVRPQSS NSSKKKATKS QLESDASVGP NGKASPEEGE SEVSKPGSRV GRRRKASAKS QNGTEDAGLD
201: NPDLGPFLLK HARDLIASDN PRRALKYALR ATKSFEKCAG GKPSLNLVMS LHVVAAIHCN MGKYEEAVPV LQRSLEIPVT EEGQEHALAK FSGCMQLGDT
301: YGMLGQIALS LQWYAKGLEI QKQTLGEQDP RVGETCRYLA EAHVQALQLD EAQKLCQMAL DIHRDNGQPA SLEETADRRL MGLICDTKGD HEAALEHLVM
401: ASMAMVANGQ ETEVASVDCS IGDIYLSLGR YDEAVCAYQK ALTVFKTSKG ENHATVASVF LRLADLYNKT GKLRESKSYC ENALKIYQKP IPGTSLEEIA
501: TGLTDVSAIY ETMNEHDQAL KLLQKALKMY NNSAGQQSTI AGIEAQIGVL HYISGNYGDA YDSFKSAITK LRTCGEKKSA FFGIALNQMG LACVQRYSIN
601: EAAELFEEAR TVLEQEYGPY HADTLGVYSN LAGTYDAMGR LDEAIEILEY VVEMREEKLG TANPDVDDEK RRLAELLKEA GRGRSRKAKS LENLLETNPY
701: TIGKRTTVAA
001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
Arabidopsis Description
KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.