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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G125000.1
TraesCS1A01G177600.1
TraesCS1A01G189000.1
TraesCS1B01G142300.1
TraesCS1B01G196700.3
TraesCS1B01G202600.1
TraesCS1B01G361800.1
TraesCS1D01G129000.2
TraesCS1D01G176100.1
TraesCS1D01G187400.1
TraesCS3A01G136500.1
TraesCS3D01G137200.1
TraesCS4A01G361100.1
TraesCS4A01G365100.1
TraesCS5A01G259000.1
TraesCS5B01G230700.1
TraesCS5B01G511800.1
TraesCS5D01G512300.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G60200.1 TraesCS1A01G125000.1 AT1G06390.1 21798944
AT3G60200.1 TraesCS1B01G142300.1 AT1G06390.1 21798944
AT3G60200.1 TraesCS1B01G361800.1 AT1G06390.1 21798944
AT3G60200.1 TraesCS1D01G129000.2 AT1G06390.1 21798944
AT3G60200.1 TraesCS3A01G136500.1 AT1G06390.1 21798944
AT3G60200.1 TraesCS3D01G137200.1 AT1G06390.1 21798944
AT3G60200.1 TraesCS4A01G365100.1 AT1G06390.1 21798944
AT3G60200.1 TraesCS5A01G259000.1 AT1G06390.1 21798944
AT3G60200.1 TraesCS5B01G230700.1 AT1G06390.1 21798944
AT3G60200.1 TraesCS1A01G189000.1 AT4G00720.1 21798944
AT3G60200.1 TraesCS1B01G196700.3 AT4G00720.1 21798944
AT3G60200.1 TraesCS1D01G187400.1 AT4G00720.1 21798944
AT3G60200.1 TraesCS1A01G177600.1 AT4G39050.1 21798944
AT3G60200.1 TraesCS1B01G202600.1 AT4G39050.1 21798944
AT3G60200.1 TraesCS1D01G176100.1 AT4G39050.1 21798944
AT3G60200.1 TraesCS4A01G361100.1 AT5G26751.1 21798944
AT3G60200.1 TraesCS5B01G511800.1 AT5G26751.1 21798944
AT3G60200.1 TraesCS5D01G512300.2 AT5G26751.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G451800.1 Wheat nucleus 89.82 90.46
TraesCS2B01G473100.1 Wheat cytosol 82.11 83.87
Os04t0588000-00 Rice nucleus 30.53 57.24
Zm00001d002512_P001 Maize cytosol 56.14 55.75
EES12746 Sorghum nucleus 57.19 55.07
TraesCS6A01G263100.1 Wheat mitochondrion, nucleus 52.28 51.56
TraesCS1A01G214000.1 Wheat mitochondrion, nucleus 35.09 35.59
KRH66386 Soybean mitochondrion 8.42 34.29
CDY41187 Canola cytosol, mitochondrion, nucleus, plastid 32.63 34.19
CDX71830 Canola cytosol, mitochondrion, nucleus, plastid 31.23 32.84
Bra007514.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 31.23 32.6
GSMUA_AchrUn_... Banana cytosol, mitochondrion, nucleus, plastid 23.51 31.75
KRH48907 Soybean nucleus 30.53 31.52
VIT_15s0021g00520.t01 Wine grape nucleus 33.33 31.35
AT3G60200.1 Thale cress cytosol, mitochondrion, nucleus, plastid 32.98 30.82
KRH00975 Soybean nucleus 31.93 30.23
CDY48240 Canola plastid 29.12 30.07
CDY23445 Canola nucleus 25.61 29.8
CDY42673 Canola nucleus 30.18 29.76
CDY30478 Canola nucleus 25.61 29.55
CDX89054 Canola cytosol 30.18 29.55
Bra004849.1-P Field mustard plastid 29.12 29.54
CDX74671 Canola plastid 29.12 29.54
Bra014506.1-P Field mustard cytosol 29.82 29.21
AT2G44600.1 Thale cress cytosol, mitochondrion, nucleus, plastid 31.93 29.07
Bra037642.1-P Field mustard nucleus 24.91 28.86
KRH40251 Soybean cytosol 31.23 28.62
Solyc01g088530.2.1 Tomato mitochondrion, nucleus 30.88 28.57
PGSC0003DMT400004234 Potato nucleus 30.88 28.21
CDY64077 Canola cytosol 23.86 27.76
Bra003403.1-P Field mustard cytosol 23.86 27.64
CDX98409 Canola nucleus 22.46 26.56
Protein Annotations
EnsemblPlants:TraesCS2A01G452000.1EnsemblPlantsGene:TraesCS2A01G452000InterPro:UPF0503PANTHER:PTHR31659PANTHER:PTHR31659:SF7PFAM:PF05340
SEG:segMapMan:35.2::::
Description
No Description!
Coordinates
chr2A:+:701230346..701231203
Molecular Weight (calculated)
30607.4 Da
IEP (calculated)
11.519
GRAVY (calculated)
-0.703
Length
285 amino acids
Sequence
(BLAST)
001: MRCRTHPYES AVGVCAACLR GRLLALAAAQ NQAPSLPPTP PPPEPVPLFP RSVSPYVCPR KSDAASGPGP GAWRHPSSRL FFRTPQVGPG TGFEEGDIGF
101: QIRRRRSGKL SALAALFGGH RHHQHDGSEE KGADGGKERK HGSWLAGIMP RARGRRKEEP AAESPRPPRR RSSLAISNRG LSPVRCSYED SEEGGSVADS
201: PWRPSPMRKT PCRRLLGGAG AGVSGFAVCI SPLVRPSPAR NHHRAPPDAP ALSGELRPSP LHHPPSGSSL HHCRSWKLAD GGRFR
Best Arabidopsis Sequence Match ( AT2G44600.1 )
(BLAST)
001: MRCKRHTVDF SSSIGVCASC LRERLFTLAV STAASENDDN DHRHSRISPP PLLFPRSVSP YVAPRKSDAG TGTGAGGRDS VASSNNRFFA TPQVVVQSSS
101: SEKVFESDRS FKKKKSGLSR FSSFFRTRSD DYDSRRDSCD ASTVFSQPSS ATTSRSWFSK VISVRSKKQS TTNTCYIEDL IASESDHHHH NQNRPRQRYC
201: RGMSPAGDST TNDESVEESP GRLRRTPVMG TPGRKKTATI GIGRSVSGMA FCLSPLVRAK PNCSSNWKAK FPPDFGYSGE LKSPAKPHLS TAASFCGNRS
301: KKLVDLGRVD HRR
Arabidopsis Description
At2g44600/F16B22.9 [Source:UniProtKB/TrEMBL;Acc:O80500]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.