Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30478 | Canola | nucleus | 89.43 | 89.07 |
| Bra004849.1-P | Field mustard | plastid | 59.76 | 52.31 |
| AT2G44600.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 57.72 | 45.37 |
| KRH66386 | Soybean | mitochondrion | 12.6 | 44.29 |
| Bra007514.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 46.34 | 41.76 |
| Bra003403.1-P | Field mustard | cytosol | 41.06 | 41.06 |
| Bra014506.1-P | Field mustard | cytosol | 45.53 | 38.49 |
| Solyc01g088530.2.1 | Tomato | mitochondrion, nucleus | 36.99 | 29.55 |
| PGSC0003DMT400004234 | Potato | nucleus | 36.99 | 29.17 |
| KRH48907 | Soybean | nucleus | 32.52 | 28.99 |
| KRH00975 | Soybean | nucleus | 35.37 | 28.9 |
| KRH40251 | Soybean | cytosol | 36.18 | 28.62 |
| VIT_15s0021g00520.t01 | Wine grape | nucleus | 34.55 | 28.05 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 23.17 | 27.01 |
| GSMUA_Achr2P04810_001 | Banana | nucleus | 32.11 | 26.78 |
| Os04t0588000-00 | Rice | nucleus | 16.26 | 26.32 |
| GSMUA_Achr10P... | Banana | nucleus | 30.89 | 26.03 |
| TraesCS2B01G473100.1 | Wheat | cytosol | 28.46 | 25.09 |
| TraesCS2D01G451800.1 | Wheat | nucleus | 28.86 | 25.09 |
| TraesCS2A01G452000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 28.86 | 24.91 |
| Zm00001d017657_P001 | Maize | nucleus | 28.05 | 24.3 |
| TraesCS6D01G243600.1 | Wheat | mitochondrion, nucleus | 28.05 | 24.21 |
| Zm00001d051505_P001 | Maize | nucleus | 28.46 | 24.05 |
| GSMUA_Achr3P27500_001 | Banana | cytosol | 28.86 | 23.59 |
| TraesCS6B01G290200.1 | Wheat | mitochondrion, nucleus | 27.24 | 23.26 |
| Os02t0689500-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 27.24 | 23.1 |
| Zm00001d047060_P001 | Maize | nucleus | 21.54 | 22.84 |
| TraesCS6A01G263100.1 | Wheat | mitochondrion, nucleus | 26.83 | 22.84 |
| Zm00001d002512_P001 | Maize | cytosol | 26.42 | 22.65 |
| EES12746 | Sorghum | nucleus | 27.24 | 22.64 |
| EES05698 | Sorghum | nucleus | 28.05 | 22.48 |
| HORVU1Hr1G054570.1 | Barley | nucleus | 24.39 | 22.14 |
| Os10t0567600-01 | Rice | plasma membrane | 25.61 | 21.58 |
| TraesCS1A01G214000.1 | Wheat | mitochondrion, nucleus | 23.98 | 21.0 |
| TraesCS1B01G227800.1 | Wheat | nucleus | 23.98 | 21.0 |
| TraesCS1D01G216900.1 | Wheat | mitochondrion, nucleus | 23.58 | 20.21 |
| Zm00001d030004_P001 | Maize | mitochondrion, nucleus | 23.58 | 19.46 |
| EER91903 | Sorghum | nucleus | 24.8 | 18.83 |
| HORVU7Hr1G082390.1 | Barley | nucleus | 23.17 | 16.76 |
Protein Annotations
Description
AT2G44600 (E=9e-035) | unknown protein
Coordinates
chrA04:+:18363825..18364565
Molecular Weight (calculated)
26960.4 Da
IEP (calculated)
10.616
GRAVY (calculated)
-0.816
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCKRHTVDS SSTIGVCASC LRERLFSFAA SEDNDHHHHV HSRTSSPPPL VFPRSVSPYA AARNSNARGG GGAGEASESY GGEGSSSWEK VFETNRSVKK
101: KQTGLSRFST LFGTDRSWFS KVLSPRSKTT TCYIEDLIAS ESNHHQQRPR HSYCKGMSPA NELESFEDSP GRARRTPATG TPGRRKTATT TMGLCLSPLV
201: RARPNCSFGY TGYPKSPVKQ HISTATSFSA NRSKKLADLG RADNRR
101: KQTGLSRFST LFGTDRSWFS KVLSPRSKTT TCYIEDLIAS ESNHHQQRPR HSYCKGMSPA NELESFEDSP GRARRTPATG TPGRRKTATT TMGLCLSPLV
201: RARPNCSFGY TGYPKSPVKQ HISTATSFSA NRSKKLADLG RADNRR
001: MRCKRHTVDF SSSIGVCASC LRERLFTLAV STAASENDDN DHRHSRISPP PLLFPRSVSP YVAPRKSDAG TGTGAGGRDS VASSNNRFFA TPQVVVQSSS
101: SEKVFESDRS FKKKKSGLSR FSSFFRTRSD DYDSRRDSCD ASTVFSQPSS ATTSRSWFSK VISVRSKKQS TTNTCYIEDL IASESDHHHH NQNRPRQRYC
201: RGMSPAGDST TNDESVEESP GRLRRTPVMG TPGRKKTATI GIGRSVSGMA FCLSPLVRAK PNCSSNWKAK FPPDFGYSGE LKSPAKPHLS TAASFCGNRS
301: KKLVDLGRVD HRR
101: SEKVFESDRS FKKKKSGLSR FSSFFRTRSD DYDSRRDSCD ASTVFSQPSS ATTSRSWFSK VISVRSKKQS TTNTCYIEDL IASESDHHHH NQNRPRQRYC
201: RGMSPAGDST TNDESVEESP GRLRRTPVMG TPGRKKTATI GIGRSVSGMA FCLSPLVRAK PNCSSNWKAK FPPDFGYSGE LKSPAKPHLS TAASFCGNRS
301: KKLVDLGRVD HRR
Arabidopsis Description
At2g44600/F16B22.9 [Source:UniProtKB/TrEMBL;Acc:O80500]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.