Factsheet for HORVU7Hr1G082390.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G047110.10
HORVU1Hr1G048580.8
HORVU2Hr1G051860.1
HORVU3Hr1G026020.3
HORVU5Hr1G117030.1
HORVU6Hr1G008360.2
HORVU6Hr1G046490.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G60200.1	HORVU2Hr1G051860.1	AT1G06390.1	21798944
AT3G60200.1	HORVU3Hr1G026020.3	AT1G06390.1	21798944
AT3G60200.1	HORVU6Hr1G008360.2	AT1G06390.1	21798944
AT3G60200.1	HORVU6Hr1G046490.1	AT1G06390.1	21798944
AT3G60200.1	HORVU1Hr1G048580.8	AT4G00720.1	21798944
AT3G60200.1	HORVU1Hr1G047110.10	AT4G39050.1	21798944
AT3G60200.1	HORVU5Hr1G117030.1	AT5G26751.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G054570.1	Barley	nucleus	69.71	87.45
TraesCS1A01G214000.1	Wheat	mitochondrion, nucleus	66.76	80.78
TraesCS1D01G216900.1	Wheat	mitochondrion, nucleus	67.94	80.49
TraesCS1B01G227800.1	Wheat	nucleus	65.29	79.0
Os10t0567600-01	Rice	plasma membrane	49.12	57.19
Zm00001d047060_P001	Maize	nucleus	37.65	55.17
EER91903	Sorghum	nucleus	49.41	51.85
KRH66386	Soybean	mitochondrion	6.76	32.86
KRH00975	Soybean	nucleus	25.0	28.24
KRH40251	Soybean	cytosol	25.59	27.97
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	17.35	27.96
Solyc01g088530.2.1	Tomato	mitochondrion, nucleus	22.65	25.0
PGSC0003DMT400004234	Potato	nucleus	22.94	25.0
CDX98409	Canola	nucleus	17.65	24.9
VIT_15s0021g00520.t01	Wine grape	nucleus	22.06	24.75
AT3G60200.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	22.06	24.59
CDY64077	Canola	cytosol	17.65	24.49
Bra003403.1-P	Field mustard	cytosol	17.65	24.39
KRH48907	Soybean	nucleus	19.71	24.28
CDY41187	Canola	cytosol, mitochondrion, nucleus, plastid	19.41	24.26
Bra007514.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	19.41	24.18
CDX71830	Canola	cytosol, mitochondrion, nucleus, plastid	18.82	23.62
CDY48240	Canola	plastid	18.82	23.19
Bra037642.1-P	Field mustard	nucleus	16.76	23.17
CDX74671	Canola	plastid	19.12	23.13
Bra004849.1-P	Field mustard	plastid	19.12	23.13
Bra014506.1-P	Field mustard	cytosol	19.41	22.68
CDX89054	Canola	cytosol	19.12	22.34
CDY42673	Canola	nucleus	18.82	22.15
CDY30478	Canola	nucleus	15.59	21.46
CDY23445	Canola	nucleus	15.29	21.22
AT2G44600.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	19.41	21.09

Protein Annotations

EnsemblPlants:HORVU7Hr1G082390.1	EnsemblPlantsGene:HORVU7Hr1G082390	InterPro:UPF0503	PANTHER:PTHR35486	PFAM:PF05340	SEG:seg
UniParc:UPI000B47BA53	UniProt:A0A287X3M6	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:493982266..493983288

Molecular Weight (calculated)

37534.2 Da

IEP (calculated)

11.815

GRAVY (calculated)

-0.840

Length

340 amino acids

Sequence
(BLAST)

001: MKIRRHTVLE LETTVPTIHN PRYRVLHRIP HHPDPARERG PTVRLFGFSL TQSRPCTTCT PLSQRPQTTW PPACMQLITN RWKLHPYANA LGVCAPCLRD
101: RLLVLAADCS SSSSRGSSPT RVAAAPAQQH RRSDACAYTS SRHSNSHRPE LLFFSTPQVG PVTRAADDAP RESERKKSFH RRRSFLAALF GGGRRGGRDE
201: ESEGKKDPPR RSTSWLSAIV RRKRRPDAPS SSLPRPADEE PESPGGSTSS SWWFPSPSPA RHHQRRSKPG GSGASGDGIS GFAVCLSPLV GPSWGGPRRP
301: YQQPDPSTLG ESHRRHLSAS SAASFGRNTS RKLADMGRFR

Best Arabidopsis Sequence Match ( AT2G44600.1 )
(BLAST)

001: MRCKRHTVDF SSSIGVCASC LRERLFTLAV STAASENDDN DHRHSRISPP PLLFPRSVSP YVAPRKSDAG TGTGAGGRDS VASSNNRFFA TPQVVVQSSS
101: SEKVFESDRS FKKKKSGLSR FSSFFRTRSD DYDSRRDSCD ASTVFSQPSS ATTSRSWFSK VISVRSKKQS TTNTCYIEDL IASESDHHHH NQNRPRQRYC
201: RGMSPAGDST TNDESVEESP GRLRRTPVMG TPGRKKTATI GIGRSVSGMA FCLSPLVRAK PNCSSNWKAK FPPDFGYSGE LKSPAKPHLS TAASFCGNRS
301: KKLVDLGRVD HRR

Arabidopsis Description

At2g44600/F16B22.9 [Source:UniProtKB/TrEMBL;Acc:O80500]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.