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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 4
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G06390.1 HORVU6Hr1G068770.1 AT3G50910.1 21798944
AT2G30980.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT2G30980.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT2G30980.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT2G30980.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT2G30980.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT2G30980.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT2G30980.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT2G30980.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT2G30980.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT2G30980.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT2G30980.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT2G30980.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT2G30980.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT2G30980.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT2G30980.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT2G30980.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT2G30980.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT2G30980.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT2G30980.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT2G30980.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT2G30980.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT2G30980.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT2G30980.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT2G30980.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT4G18710.1 HORVU2Hr1G051860.1 AT4G18710.1 18599455
AT4G18710.1 HORVU3Hr1G026020.3 AT4G18710.1 18599455
AT4G18710.1 HORVU6Hr1G008360.2 AT4G18710.1 18599455
AT4G18710.1 HORVU6Hr1G046490.1 AT4G18710.1 18599455
AT4G18710.1 HORVU3Hr1G096410.4 AT5G62000.1 18599455
AT4G18710.1 HORVU3Hr1G096510.3 AT5G62000.1 18599455
AT4G18710.1 HORVU3Hr1G097200.10 AT5G62000.1 18599455
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G136500.1 Wheat cytosol 89.13 97.62
Os01t0205700-01 Rice cytosol 52.17 92.7
CDY69647 Canola cytosol 71.5 87.06
TraesCS3D01G137200.1 Wheat cytosol 84.06 86.78
VIT_10s0003g01480.t01 Wine grape cytosol 79.47 86.58
CDY70859 Canola cytosol 78.02 86.36
Bra012581.1-P Field mustard cytosol 77.78 86.1
Bra013341.1-P Field mustard cytosol 77.78 86.1
CDX78886 Canola cytosol 77.78 86.1
EES00093 Sorghum cytosol 83.82 85.89
CDY64921 Canola cytosol 77.54 85.83
CDY66894 Canola cytosol 77.29 85.56
Zm00001d008893_P001 Maize cytosol 83.82 85.47
Bra020994.1-P Field mustard cytosol 77.78 84.74
AT4G18710.1 Thale cress cytosol 77.78 84.74
CDY34051 Canola cytosol 77.78 84.74
PGSC0003DMT400073091 Potato cytosol 78.02 84.56
Solyc02g072300.2.1 Tomato cytosol 78.02 84.56
CDX99437 Canola cytosol 77.78 84.51
KRH61707 Soybean cytosol 77.54 84.47
KRH21245 Soybean cytosol 75.85 83.96
KRH52380 Soybean cytosol 76.81 83.68
KRH11042 Soybean cytosol 76.09 82.89
Solyc03g006070.2.1 Tomato cytosol 75.6 81.94
PGSC0003DMT400068764 Potato cytosol 75.6 81.94
CDY62551 Canola cytosol 52.17 81.82
VIT_12s0028g01810.t01 Wine grape cytosol 78.5 80.85
AT1G06390.1 Thale cress cytosol 78.26 79.61
Zm00001d039407_P001 Maize cytosol 82.37 79.49
AT2G30980.1 Thale cress cytosol 78.5 78.88
Bra018285.1-P Field mustard cytosol 67.15 78.75
CDX97773 Canola cytosol 77.54 78.29
Bra021685.1-P Field mustard cytosol 77.54 78.29
CDY52692 Canola cytosol, mitochondrion, nucleus 21.26 77.88
Solyc06g082640.2.1 Tomato cytosol 42.03 77.33
KRH25797 Soybean cytosol 78.26 77.14
KRH55721 Soybean cytosol 77.29 76.37
HORVU6Hr1G046490.1 Barley cytosol 23.19 76.19
CDY10766 Canola extracellular, plasma membrane, vacuole 41.06 75.89
PGSC0003DMT400052647 Potato cytosol 79.47 75.81
KRH42881 Soybean cytosol 70.05 75.72
KRH58985 Soybean cytosol 69.81 75.46
Solyc07g055200.2.1 Tomato cytosol 79.47 75.29
KRH27067 Soybean cytosol 73.43 74.33
HORVU6Hr1G008360.2 Barley mitochondrion, peroxisome, plasma membrane 40.34 74.22
KRH22265 Soybean cytosol 74.64 74.1
CDY72370 Canola cytosol 18.12 70.75
HORVU4Hr1G079520.3 Barley cytosol 42.51 70.68
HORVU2Hr1G051860.1 Barley cytosol 28.5 70.24
HORVU3Hr1G034440.2 Barley cytosol 68.12 69.46
Solyc10g037910.1.1 Tomato cytosol, plasma membrane 39.37 69.36
HORVU5Hr1G117030.1 Barley cytosol 67.87 68.87
HORVU1Hr1G016490.9 Barley cytosol 66.18 66.83
KRH21176 Soybean cytosol 40.34 64.23
KRH70115 Soybean cytosol 47.34 56.48
Solyc04g025600.1.1 Tomato cytosol 14.25 55.14
HORVU1Hr1G048580.8 Barley cytosol, nucleus 66.67 48.42
HORVU4Hr1G030100.1 Barley cytosol 7.73 34.78
HORVU2Hr1G063420.1 Barley cytosol 24.88 30.93
HORVU4Hr1G069390.1 Barley cytosol 24.64 30.72
HORVU2Hr1G126490.4 Barley plastid 22.22 27.96
HORVU7Hr1G035240.1 Barley cytosol 20.77 27.3
HORVU5Hr1G097230.1 Barley cytosol, plastid 24.88 26.96
HORVU5Hr1G097400.2 Barley cytosol, mitochondrion, nucleus, plastid 25.36 24.53
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.3MapMan:18.4.3.4Gene3D:3.30.200.20UniProt:A0A287KHC6GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU3Hr1G026020EnsemblPlants:HORVU3Hr1G026020.3InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24057PANTHER:PTHR24057:SF17
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000B475979
SEG:seg:::::
Description
No Description!
Coordinates
chrchr3H:+:103829144..103832898
Molecular Weight (calculated)
46995.9 Da
IEP (calculated)
9.718
GRAVY (calculated)
-0.317
Length
414 amino acids
Sequence
(BLAST)
001: WTRRRGRSPW CWTRRPRSPP PSRPGFRGRS AAPGACFANA RCSGALQART EGGDPVTGHI ISTTIGGKNG EPKRTISYMA ERVVGTGSFG IVFQAKCLET
101: GETVAIKKVL QDRRYKNREL QLMRSMDHPN VVSLKHCFFS TTSRDELFLN LVMEYVPETL YRVLKHYSNA NQRMPLIYVK LYMYQLFRGL AYVHTVPGVC
201: HRDVKPQNVL VDPLTHQVKI CDFGSAKVLV PGEPNIAYIC SRYYRAPELI FGATEYTTSI DIWSAGCVLA ELLLGQPLFP GETAVDQLVE IIKVLGTPTR
301: EEIRCMNPNY TEFRFPQIKA HPWHKIFHKR MPAEAIDLAS RLLQYSPNLR CTALDACAHS FFDELREPNA RLPNGRPFPP LFNFKPELAN ASPELINRLV
401: PEHVRRQNGL NFAH
Best Arabidopsis Sequence Match ( AT1G06390.1 )
(BLAST)
001: MASLPLGPQP HALAPPLQLH DGDALKRRPE LDSDKEMSAA VIEGNDAVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGESVAIKK
101: VLQDRRYKNR ELQLMRPMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLRHYT SSNQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFNELREP NARLPNGRPL PPLFNFKQEL GGASMELINR LIPEHVRRQM
401: STGLQNS
Arabidopsis Description
ASK9SK22 [Source:UniProtKB/TrEMBL;Acc:A0A178WCN5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.