Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G30980.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT2G30980.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT2G30980.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT2G30980.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT2G30980.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52692 | Canola | cytosol, mitochondrion, nucleus | 27.54 | 91.15 |
| Bra021685.1-P | Field mustard | cytosol | 99.73 | 90.98 |
| CDX97773 | Canola | cytosol | 99.73 | 90.98 |
| AT2G30980.1 | Thale cress | cytosol | 96.52 | 87.62 |
| CDX78886 | Canola | cytosol | 87.43 | 87.43 |
| CDY70859 | Canola | cytosol | 87.17 | 87.17 |
| Os01t0205700-01 | Rice | cytosol | 54.28 | 87.12 |
| CDY69647 | Canola | cytosol | 78.88 | 86.76 |
| CDY64921 | Canola | cytosol | 86.63 | 86.63 |
| CDX99437 | Canola | cytosol | 86.9 | 85.3 |
| CDY34051 | Canola | cytosol | 86.63 | 85.26 |
| TraesCS3A01G136500.1 | Wheat | cytosol | 85.56 | 84.66 |
| CDY10766 | Canola | extracellular, plasma membrane, vacuole | 49.47 | 82.59 |
| CDY62551 | Canola | cytosol | 58.02 | 82.2 |
| KRH25797 | Soybean | cytosol | 91.44 | 81.43 |
| KRH55721 | Soybean | cytosol | 91.18 | 81.38 |
| Os05t0207500-01 | Rice | cytosol | 87.17 | 81.09 |
| TraesCS1D01G129000.2 | Wheat | cytosol | 86.9 | 80.85 |
| TraesCS1B01G142300.1 | Wheat | cytosol | 86.9 | 80.85 |
| TraesCS1A01G125000.1 | Wheat | cytosol | 86.63 | 80.6 |
| EES00093 | Sorghum | cytosol | 85.29 | 78.96 |
| Zm00001d008893_P001 | Maize | cytosol | 84.49 | 77.83 |
| HORVU3Hr1G026020.3 | Barley | mitochondrion | 85.56 | 77.29 |
| KRH27067 | Soybean | cytosol | 84.49 | 77.26 |
| KRH22265 | Soybean | cytosol | 85.56 | 76.74 |
| PGSC0003DMT400052647 | Potato | cytosol | 88.5 | 76.27 |
| TraesCS3D01G137200.1 | Wheat | cytosol | 81.55 | 76.06 |
| Solyc07g055200.2.1 | Tomato | cytosol | 88.5 | 75.74 |
| Zm00001d039407_P001 | Maize | cytosol | 85.03 | 74.13 |
| CDX70574 | Canola | cytosol | 80.48 | 73.59 |
| CDX78587 | Canola | cytosol | 80.48 | 73.41 |
| CDX88238 | Canola | cytosol | 78.34 | 72.7 |
| CDX80585 | Canola | cytosol | 77.81 | 72.39 |
| HORVU6Hr1G046490.1 | Barley | cytosol | 24.33 | 72.22 |
| CDY19757 | Canola | cytosol | 77.81 | 71.67 |
| CDX87033 | Canola | cytosol | 77.81 | 71.67 |
| CDY49981 | Canola | cytosol | 78.07 | 71.05 |
| CDX74129 | Canola | cytosol | 78.07 | 71.05 |
| CDY05202 | Canola | cytosol | 77.81 | 70.98 |
| HORVU6Hr1G008360.2 | Barley | mitochondrion, peroxisome, plasma membrane | 41.44 | 68.89 |
| CDY72370 | Canola | cytosol | 19.25 | 67.92 |
| CDY18828 | Canola | cytosol | 73.26 | 67.82 |
| HORVU2Hr1G051860.1 | Barley | cytosol | 28.88 | 64.29 |
| CDX93471 | Canola | cytosol | 68.72 | 61.63 |
| CDX94939 | Canola | cytosol | 68.72 | 61.63 |
| CDY65729 | Canola | plastid | 68.98 | 61.28 |
| CDY31060 | Canola | plastid | 68.72 | 61.05 |
| CDX91895 | Canola | mitochondrion | 73.8 | 59.23 |
| Solyc04g025600.1.1 | Tomato | cytosol | 16.84 | 58.88 |
| CDY45686 | Canola | mitochondrion | 67.91 | 58.8 |
| CDX67856 | Canola | mitochondrion | 67.91 | 58.8 |
| CDX74346 | Canola | cytosol, mitochondrion | 73.53 | 58.76 |
| CDY07202 | Canola | mitochondrion | 73.26 | 58.17 |
| CDY51144 | Canola | mitochondrion | 74.06 | 57.95 |
| CDY52332 | Canola | mitochondrion | 67.65 | 57.89 |
| CDY65303 | Canola | mitochondrion | 67.11 | 57.44 |
| CDY27737 | Canola | cytosol | 77.81 | 56.61 |
| CDX77348 | Canola | plastid | 25.94 | 55.43 |
| CDX78658 | Canola | cytosol, nucleus, peroxisome | 71.39 | 47.01 |
| TraesCS5A01G259000.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 13.64 | 44.35 |
| TraesCS1B01G361800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 13.37 | 43.48 |
| TraesCS5B01G230700.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 13.1 | 41.88 |
| TraesCS4A01G365100.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 12.83 | 41.03 |
| CDY70654 | Canola | cytosol | 17.65 | 38.37 |
| CDX83104 | Canola | cytosol | 27.81 | 31.61 |
| CDY57680 | Canola | cytosol | 28.07 | 31.53 |
| CDY30613 | Canola | cytosol | 28.07 | 31.53 |
| CDY57359 | Canola | cytosol | 27.81 | 31.33 |
| CDX98044 | Canola | cytosol | 12.57 | 29.38 |
| CDX76880 | Canola | cytosol, mitochondrion | 26.47 | 28.53 |
| CDY71648 | Canola | plastid | 11.76 | 27.33 |
| CDX89544 | Canola | plastid | 27.01 | 24.22 |
| CDY38928 | Canola | plastid | 25.94 | 24.19 |
| CDY49445 | Canola | plastid | 26.47 | 23.52 |
| CDY67469 | Canola | vacuole | 16.31 | 20.82 |
| CDY29766 | Canola | golgi, plasma membrane | 18.98 | 20.06 |
| CDY15289 | Canola | vacuole | 14.44 | 19.57 |
| CDY25489 | Canola | golgi, plasma membrane | 17.38 | 13.37 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.3.2.3 | MapMan:18.4.3.4 | Gene3D:3.30.200.20 | GO:A0A078JJJ4 | UniProt:A0A078JJJ4 |
| EnsemblPlants:CDY66894 | ProteinID:CDY66894 | ProteinID:CDY66894.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00056795001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24057 | PANTHER:PTHR24057:SF12 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EDD6DE | : | : |
Description
BnaCnng52760DBnaCnng52760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJJ4]
Coordinates
chrLK035557:-:10714..13286
Molecular Weight (calculated)
42417.5 Da
IEP (calculated)
8.734
GRAVY (calculated)
-0.210
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAVIEGND AVTGHIISTT IGGKNGEPKQ TISYMAERVV GQGSFGIVFQ AKCLETGESV AIKKVLQDRR YKNRELQLMR LMDHPNVVSL KHCFFSTTSR
101: DELFLNLVME YVPETLYRVL KHYTNSSQRM PIFYVKLYTY QIFRGLAYIH TVPGVCHRDV KPQNLLVDPL THQCKLCDFG SAKVLVKGEA NISYICSRYY
201: RAPELIFGAT EYTSSIDIWS AGCVLAELLL GQPLFPGENS VDQLVEIIKV LGTPTREEIR CMNPNYTDFR FPQIKAHPWH KVFHKRMPPE AIDLASRLLQ
301: YSPSLRYTAL EACAHPFFNE LREPNARLPN GRPLPALFNF KQELAGASPE LINRLIPEHI RRQMSGGFPS QPGH
101: DELFLNLVME YVPETLYRVL KHYTNSSQRM PIFYVKLYTY QIFRGLAYIH TVPGVCHRDV KPQNLLVDPL THQCKLCDFG SAKVLVKGEA NISYICSRYY
201: RAPELIFGAT EYTSSIDIWS AGCVLAELLL GQPLFPGENS VDQLVEIIKV LGTPTREEIR CMNPNYTDFR FPQIKAHPWH KVFHKRMPPE AIDLASRLLQ
301: YSPSLRYTAL EACAHPFFNE LREPNARLPN GRPLPALFNF KQELAGASPE LINRLIPEHI RRQMSGGFPS QPGH
001: MTSIPLGPPQ PPSLAPQPPH LHGGDSLKRR PDIDNDKEMS AAVIEGNDAV TGHIISTTIG GKNGEPKQTI SYMAERVVGT GSFGIVFQAK CLETGESVAI
101: KKVLQDRRYK NRELQLMRLM DHPNVVSLKH CFFSTTTRDE LFLNLVMEYV PETLYRVLKH YTSSNQRMPI FYVKLYTYQI FRGLAYIHTA PGVCHRDVKP
201: QNLLVDPLTH QCKLCDFGSA KVLVKGEANI SYICSRYYRA PELIFGATEY TSSIDIWSAG CVLAELLLGQ PLFPGENSVD QLVEIIKVLG TPTREEIRCM
301: NPNYTDFRFP QIKAHPWHKV FHKRMPPEAI DLASRLLQYS PSLRCTALEA CAHPFFNELR EPNARLPNGR PLPPLFNFKQ ELSGASPELI NRLIPEHVRR
401: QMNGGFPFQA GP
101: KKVLQDRRYK NRELQLMRLM DHPNVVSLKH CFFSTTTRDE LFLNLVMEYV PETLYRVLKH YTSSNQRMPI FYVKLYTYQI FRGLAYIHTA PGVCHRDVKP
201: QNLLVDPLTH QCKLCDFGSA KVLVKGEANI SYICSRYYRA PELIFGATEY TSSIDIWSAG CVLAELLLGQ PLFPGENSVD QLVEIIKVLG TPTREEIRCM
301: NPNYTDFRFP QIKAHPWHKV FHKRMPPEAI DLASRLLQYS PSLRCTALEA CAHPFFNELR EPNARLPNGR PLPPLFNFKQ ELSGASPELI NRLIPEHVRR
401: QMNGGFPFQA GP
Arabidopsis Description
ASK6SKdZeta [Source:UniProtKB/TrEMBL;Acc:A0A178W1X9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.