CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73319
CDY28412

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14640.1	CDX73319	AT1G35210.1	21798944
AT5G14640.1	CDY28412	AT1G35210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006263.1-P	Field mustard	cytosol	100.0	99.76
CDX78587	Canola	cytosol	98.53	98.29
AT5G14640.1	Thale cress	cytosol	95.84	95.61
VIT_14s0066g01050.t01	Wine grape	cytosol	89.24	88.59
PGSC0003DMT400080607	Potato	cytosol	88.02	87.8
Solyc12g062870.1.1	Tomato	cytosol	88.02	87.8
CDX80585	Canola	cytosol	85.57	87.06
Solyc02g086670.2.1	Tomato	cytosol	85.82	86.88
CDX88238	Canola	cytosol	85.57	86.85
PGSC0003DMT400001392	Potato	cytosol	86.06	85.85
CDY19757	Canola	cytosol	84.84	85.47
CDX87033	Canola	cytosol	84.84	85.47
CDY49981	Canola	cytosol	83.86	83.45
CDX74129	Canola	cytosol	83.86	83.45
CDY05202	Canola	cytosol	83.62	83.41
CDY66894	Canola	cytosol	73.59	80.48
CDX78886	Canola	cytosol	73.35	80.21
CDY72370	Canola	cytosol	20.78	80.19
CDY70859	Canola	cytosol	73.11	79.95
CDY69647	Canola	cytosol	66.26	79.71
CDY64921	Canola	cytosol	72.62	79.41
CDX99437	Canola	cytosol	73.84	79.27
CDY34051	Canola	cytosol	73.35	78.95
CDY18828	Canola	cytosol	77.51	78.47
CDY10766	Canola	extracellular, plasma membrane, vacuole	41.08	75.0
CDX97773	Canola	cytosol	74.82	74.63
CDY62551	Canola	cytosol	48.17	74.62
CDY65729	Canola	plastid	74.33	72.21
CDY31060	Canola	plastid	74.08	71.97
CDX94939	Canola	cytosol	72.86	71.46
CDX93471	Canola	cytosol	72.86	71.46
CDY52692	Canola	cytosol, mitochondrion, nucleus	19.56	70.8
CDX77348	Canola	plastid	28.61	66.86
CDY27737	Canola	cytosol	83.13	66.15
CDX91895	Canola	mitochondrion	75.06	65.88
CDX74346	Canola	cytosol, mitochondrion	75.06	65.6
CDX67856	Canola	mitochondrion	68.95	65.28
CDY45686	Canola	mitochondrion	68.95	65.28
CDY07202	Canola	mitochondrion	75.06	65.18
CDY52332	Canola	mitochondrion	69.19	64.76
CDY51144	Canola	mitochondrion	75.55	64.64
CDY65303	Canola	mitochondrion	68.22	63.84
CDX78658	Canola	cytosol, nucleus, peroxisome	81.91	58.98
CDY70654	Canola	cytosol	15.4	36.63
CDY30613	Canola	cytosol	26.16	32.13
CDY57359	Canola	cytosol	25.92	31.93
CDX83104	Canola	cytosol	25.67	31.91
CDY57680	Canola	cytosol	25.92	31.83
CDX76880	Canola	cytosol, mitochondrion	25.18	29.68
CDX98044	Canola	cytosol	11.25	28.75
CDY38928	Canola	plastid	25.43	25.94
CDX89544	Canola	plastid	26.16	25.66
CDY71648	Canola	plastid	10.02	25.47
CDY49445	Canola	plastid	25.92	25.18
CDY15289	Canola	vacuole	15.65	23.19
CDY67469	Canola	vacuole	16.38	22.87
CDY29766	Canola	golgi, plasma membrane	18.83	21.75
CDY25489	Canola	golgi, plasma membrane	17.36	14.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	GO:A0A078C331	EnsemblPlants:CDX70574
ProteinID:CDX70574	ProteinID:CDX70574.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00140415001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057
PANTHER:PTHR24057:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EDB4AE	:	:	:	:	:

Description

BnaC03g06580D

Coordinates

chrLK031791:-:1073826..1077169

Molecular Weight (calculated)

46036.9 Da

IEP (calculated)

8.518

GRAVY (calculated)

-0.256

Length

409 amino acids

Sequence
(BLAST)

001: MASVGTLPSS TATRKMNDSV CVDKLPEGIN EMKIKDDKEM EAAVVDGNGT ETGHIIVTTI GGKDGQPKQT ISYMAERVVG QGSFGIVFQA KCLETGETVA
101: IKKVLQDKRY KNRELQTMRL LDHPNVVSLK HCFFSTTEKD ELYLNLVLEY VPETVYRVSK HYSRANQRMP MIYVKLYTYQ ICRALAYIHG GVGVCHRDIK
201: PQNLLVNPHT HQVKLCDFGS AKVLVKGEPN ISYICSRYYR APELIFGATE YTTAIDIWSA GCVLAELLLG QPLFPGESGV DQLVEIIKVL GTPTREEIKC
301: MNPNYTEFKF PQIKAHPWHK IFHKRTPPEA VDLASRLLQY SPNLRSTAME AIVHPFFDEL RDPNTRLPNG RPLPPLFNFK PQELKGASVE LLSKLIPDHA
401: RKQCSFLAV

Best Arabidopsis Sequence Match ( AT5G14640.1 )
(BLAST)

001: MASVGTLPAS SMATKQSNAS ICAEKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKNGQPKQ TISYMAERIV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PIIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTTIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLVSRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRALPPLFNF KPQELKGASL ELLSKLIPDH
401: ARKQCSFLAL

Arabidopsis Description

ASK5Shaggy-related protein kinase epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8VZD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.