Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034424.1-P | Field mustard | plastid | 100.0 | 100.0 |
| CDX73319 | Canola | plastid | 95.54 | 96.15 |
| AT1G35210.1 | Thale cress | plastid | 64.33 | 64.74 |
Protein Annotations
| EnsemblPlants:CDY28412 | EnsemblPlantsGene:GSBRNA2T00040257001 | PANTHER:PTHR34046 | PANTHER:PTHR34046:SF3 | ProteinID:CDY28412 | ProteinID:CDY28412.1 |
| SEG:seg | UniParc:UPI0002547F6F | UniProt:A0A078GTG1 | MapMan:35.2 | : | : |
Description
BnaA05g18280DBnaA05g18280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTG1]
Coordinates
chrLK032219:-:405809..406336
Molecular Weight (calculated)
17578.4 Da
IEP (calculated)
10.964
GRAVY (calculated)
-0.599
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLSTSLLG IRRMSKAQEK TKNTVLCKKH PKHRQSPGVC SLCLNERLSM FIKATSSSTY SYLRLRKAPH IIYSSSTTSL SSSSSVSSCP SPLVDRRCYL
101: LMAGGSGREK GSLCMTKSRS VAHKVDDEKR KKKETRGGFF FRFGGFKKRE QERIVDN
101: LMAGGSGREK GSLCMTKSRS VAHKVDDEKR KKKETRGGFF FRFGGFKKRE QERIVDN
001: MASLSTSLLG IRRGSSNKNK AEDKTKNAVF CKKHPKHRQS PGVCSLCLNE RLSLFIKAAS SRRPRSRQIL STSSSTTSSL SSDGSSSVSS CPSPIVDRRR
101: YLLMSGGSGR GEKVISWMTK SRSVAYKVDD EKRRKKKTKT NSGFFFGLVM GTKKRQ
101: YLLMSGGSGR GEKVISWMTK SRSVAYKVDD EKRRKKKTKT NSGFFFGLVM GTKKRQ
Arabidopsis Description
Uncharacterized protein T32G9.25 [Source:UniProtKB/TrEMBL;Acc:Q9C6F2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.