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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98044 Canola cytosol 20.78 63.12
CDY30613 Canola cytosol 42.8 62.46
CDY57359 Canola cytosol 42.59 62.35
CDX83104 Canola cytosol 42.18 62.31
CDY57680 Canola cytosol 41.98 61.26
PGSC0003DMT400064191 Potato cytosol 40.33 58.86
Solyc03g044140.2.1 Tomato cytosol, nucleus 40.33 58.86
KRH28388 Soybean cytosol 40.12 58.56
Solyc02g092640.2.1 Tomato cytosol, nucleus 40.12 58.56
GSMUA_Achr5P01690_001 Banana cytosol 39.92 58.26
HORVU2Hr1G063420.1 Barley cytosol 39.92 58.26
Os07t0114400-01 Rice plasma membrane 39.92 58.26
TraesCS2D01G260500.1 Wheat cytosol 39.92 58.26
KRH77093 Soybean nucleus 39.92 58.26
EER97857 Sorghum cytosol 39.71 58.13
GSMUA_Achr6P16850_001 Banana cytosol 39.71 57.96
Zm00001d007951_P001 Maize cytosol, nucleus 39.51 57.83
GSMUA_Achr10P... Banana cytosol 39.51 57.66
TraesCS2A01G263400.1 Wheat cytosol, nucleus 39.92 56.73
Os03t0207300-01 Rice cytosol 38.07 55.72
TraesCS4D01G254600.1 Wheat cytosol 37.86 55.42
HORVU4Hr1G069390.1 Barley cytosol 37.65 55.12
TraesCS4B01G254800.1 Wheat cytosol 37.24 55.02
TraesCS4A01G049900.1 Wheat cytosol 37.24 54.52
AT3G50000.1 Thale cress golgi, plasma membrane, vacuole 43.21 52.11
Zm00001d013217_P001 Maize cytosol 40.95 51.96
CDY67469 Canola vacuole 31.28 51.88
CDX76880 Canola cytosol, mitochondrion 36.83 51.59
EER90840 Sorghum plastid 40.74 51.43
Zm00001d034125_P002 Maize mitochondrion, plastid 40.74 51.43
TraesCS5B01G404900.1 Wheat cytosol, mitochondrion 40.12 51.18
TraesCS5D01G410000.1 Wheat plastid 39.92 50.92
TraesCS5A01G400100.1 Wheat cytosol, mitochondrion 39.92 50.92
HORVU5Hr1G097230.1 Barley cytosol, plastid 39.92 50.79
Zm00001d018669_P004 Maize cytosol 39.09 50.53
KRH04471 Soybean nucleus 41.36 50.5
VIT_07s0129g00410.t01 Wine grape golgi, plasma membrane 41.36 49.63
CDY15289 Canola vacuole 27.98 49.28
KRH58068 Soybean mitochondrion 40.95 48.42
Os03t0762000-01 Rice plastid 14.4 48.28
TraesCS2B01G278700.2 Wheat cytosol 37.45 48.15
CDY29766 Canola golgi, plasma membrane 34.98 48.02
CDY38928 Canola plastid 36.63 44.39
CDX89544 Canola plastid 37.24 43.41
CDY49445 Canola plastid 36.63 42.28
CDY70654 Canola cytosol 12.14 34.3
CDY71648 Canola plastid 7.2 21.74
CDY72370 Canola cytosol 4.53 20.75
CDX80585 Canola cytosol 14.4 17.41
CDY66894 Canola cytosol 13.37 17.38
CDX88238 Canola cytosol 14.4 17.37
CDX70574 Canola cytosol 14.61 17.36
CDX78587 Canola cytosol 14.61 17.32
CDY19757 Canola cytosol 14.4 17.24
CDX87033 Canola cytosol 14.4 17.24
CDX74129 Canola cytosol 14.4 17.03
CDY49981 Canola cytosol 14.4 17.03
CDY05202 Canola cytosol 14.2 16.83
CDY18828 Canola cytosol 13.58 16.34
CDY34051 Canola cytosol 12.76 16.32
CDY62551 Canola cytosol 8.85 16.29
CDX99437 Canola cytosol 12.76 16.27
CDY69647 Canola cytosol 11.32 16.18
CDX97773 Canola cytosol 13.58 16.1
CDY64921 Canola cytosol 12.14 15.78
CDY70859 Canola cytosol 12.14 15.78
CDX78886 Canola cytosol 12.14 15.78
CDX93471 Canola cytosol 12.35 14.39
CDX94939 Canola cytosol 12.35 14.39
CDY65729 Canola plastid 12.14 14.01
CDY31060 Canola plastid 12.14 14.01
CDY07202 Canola mitochondrion 13.58 14.01
CDX91895 Canola mitochondrion 13.37 13.95
CDX74346 Canola cytosol, mitochondrion 13.37 13.89
CDY51144 Canola mitochondrion 13.37 13.6
CDX67856 Canola mitochondrion 11.93 13.43
CDY45686 Canola mitochondrion 11.93 13.43
CDY27737 Canola cytosol 14.2 13.42
CDY52332 Canola mitochondrion 11.73 13.04
CDY65303 Canola mitochondrion 11.73 13.04
CDY10766 Canola extracellular, plasma membrane, vacuole 5.97 12.95
CDX77348 Canola plastid 4.32 12.0
CDX78658 Canola cytosol, nucleus, peroxisome 13.99 11.97
CDY52692 Canola cytosol, mitochondrion, nucleus 2.06 8.85
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.9.1Gene3D:3.30.200.20GO:A0A078GJQ7UniProt:A0A078GJQ7EnsemblPlants:CDY25489
ProteinID:CDY25489ProteinID:CDY25489.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00032717001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24054PANTHER:PTHR24054:SF33
InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE013FSEG:seg
Description
BnaC09g11140DBnaC09g11140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJQ7]
Coordinates
chrLK032176:+:31105..33893
Molecular Weight (calculated)
56484.6 Da
IEP (calculated)
6.307
GRAVY (calculated)
-0.185
Length
486 amino acids
Sequence
(BLAST)
001: MRLLLLLPPP PPTLPLIVWR HLHLPCTIGA LSYLTVDCRY TNGSSFDPHL DPYSLDEEIS LRIVMSKACV YTDVNMIRPK EYWNYESLNV EWGEQDDYEV
101: VRKVERGKYS EVFEGINMNS NGKCVIKILK TVKKKKIKIL QNLCEGPNIV KLLDVVRDEH SKTPSLIFEY VNSIDFKVMY PTLTDYDIRY YIYELLKALD
201: YCHSQGIMHK DVKPHNVMID HELGKLRLID LGEQDDYEVV RKVERGKYSE VFEGINMNSN EQCVIKILKP VKKKKNLYGG PNIVKLLDVV RDQHSKTPSL
301: IFEYVNSIDF KVMYPTLTDY DIRYYIYELL KALDYCHSQG IMHRDVKPHN VMIDHELGKL RLIDWGVSLS FIILEKSITS VWPQGTLRDP DFVDLQDYDY
401: SLDMWSLGCM FAGMVLGTDE LNAYLNKYQL QLDAQLEALL FLPRNLRILR IVSNHIIHSA ETQVPSVALY TTLHLESDLI ASYAYS
Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)
001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ
Arabidopsis Description
CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.