Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007951_P001 | Maize | cytosol, nucleus | 83.81 | 96.69 |
| Zm00001d034125_P002 | Maize | mitochondrion, plastid | 96.08 | 95.58 |
| GSMUA_Achr5P01690_001 | Banana | cytosol | 81.72 | 93.99 |
| KRH28388 | Soybean | cytosol | 81.46 | 93.69 |
| Solyc03g044140.2.1 | Tomato | cytosol, nucleus | 81.2 | 93.39 |
| KRH77093 | Soybean | nucleus | 81.2 | 93.39 |
| EER90840 | Sorghum | plastid | 92.69 | 92.21 |
| PGSC0003DMT400064191 | Potato | cytosol | 80.16 | 92.19 |
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 79.9 | 91.89 |
| Bra029986.1-P | Field mustard | cytosol | 78.59 | 91.49 |
| CDX83104 | Canola | cytosol | 78.59 | 91.49 |
| CDY57680 | Canola | cytosol | 79.37 | 91.29 |
| CDY30613 | Canola | cytosol | 79.37 | 91.29 |
| CDY57359 | Canola | cytosol | 79.11 | 91.27 |
| VIT_18s0001g09320.t01 | Wine grape | cytosol | 78.85 | 90.69 |
| AT2G23080.1 | Thale cress | cytosol | 77.55 | 89.19 |
| CDY70654 | Canola | cytosol | 39.95 | 88.95 |
| HORVU5Hr1G097230.1 | Barley | cytosol, plastid | 87.47 | 87.7 |
| TraesCS5A01G400100.1 | Wheat | cytosol, mitochondrion | 86.95 | 87.4 |
| TraesCS5B01G404900.1 | Wheat | cytosol, mitochondrion | 86.68 | 87.14 |
| TraesCS5D01G410000.1 | Wheat | plastid | 86.68 | 87.14 |
| Zm00001d018669_P004 | Maize | cytosol | 79.63 | 81.12 |
| CDX98044 | Canola | cytosol | 33.42 | 80.0 |
| KRH04471 | Soybean | nucleus | 82.77 | 79.65 |
| Bra036044.1-P | Field mustard | plasma membrane | 79.63 | 78.41 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 82.51 | 78.02 |
| Bra036806.1-P | Field mustard | cytosol | 68.41 | 77.74 |
| KRH58068 | Soybean | mitochondrion | 82.77 | 77.13 |
| AT3G50000.1 | Thale cress | golgi, plasma membrane, vacuole | 80.68 | 76.67 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 80.68 | 75.55 |
| Bra031829.1-P | Field mustard | cytosol | 52.22 | 72.99 |
| CDY67469 | Canola | vacuole | 49.87 | 65.19 |
| Os03t0762000-01 | Rice | plastid | 24.28 | 64.14 |
| CDY15289 | Canola | vacuole | 45.69 | 63.41 |
| Zm00001d034137_P001 | Maize | plastid | 64.75 | 63.27 |
| CDY29766 | Canola | golgi, plasma membrane | 57.44 | 62.15 |
| CDY71648 | Canola | plastid | 26.11 | 62.11 |
| Zm00001d032025_P001 | Maize | mitochondrion | 28.72 | 55.56 |
| CDY25489 | Canola | golgi, plasma membrane | 51.96 | 40.95 |
| Zm00001d044362_P001 | Maize | extracellular, golgi | 8.88 | 31.78 |
| Zm00001d008893_P001 | Maize | cytosol | 28.98 | 27.34 |
| Zm00001d016188_P002 | Maize | cytosol | 27.94 | 25.97 |
| Zm00001d037010_P003 | Maize | cytosol | 27.15 | 25.81 |
| Zm00001d040263_P003 | Maize | cytosol | 27.42 | 25.74 |
| Zm00001d009055_P001 | Maize | cytosol | 27.15 | 25.62 |
| Zm00001d039407_P001 | Maize | cytosol | 28.46 | 25.41 |
| Zm00001d053548_P001 | Maize | cytosol | 27.94 | 25.3 |
| Zm00001d024729_P001 | Maize | plastid | 26.89 | 25.12 |
| Zm00001d008357_P002 | Maize | cytosol | 27.42 | 24.88 |
| Zm00001d039730_P001 | Maize | cytosol | 20.63 | 24.76 |
| Zm00001d048564_P003 | Maize | cytosol, mitochondrion | 28.2 | 22.98 |
| Zm00001d029664_P001 | Maize | cytosol, mitochondrion | 27.15 | 21.99 |
| Zm00001d006088_P001 | Maize | cytosol | 10.71 | 20.2 |
| Zm00001d053206_P001 | Maize | cytosol | 18.28 | 20.17 |
| Zm00001d012869_P005 | Maize | mitochondrion | 26.63 | 9.48 |
| Zm00001d028053_P001 | Maize | mitochondrion | 2.09 | 6.72 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:103625865 | MapMan:18.4.3.9.1 | Gene3D:3.30.200.20 | UniProt:A0A1D6GGK8 | ProteinID:AQK62686.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24054 | PANTHER:PTHR24054:SF33 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | TMHMM:TMhelix |
| UniParc:UPI0002218133 | EnsemblPlantsGene:Zm00001d013217 | EnsemblPlants:Zm00001d013217_P001 | EnsemblPlants:Zm00001d013217_T001 | SEG:seg | : |
Description
Casein kinase II subunit alpha-2
Coordinates
chr5:+:6646735..6652139
Molecular Weight (calculated)
44176.5 Da
IEP (calculated)
8.928
GRAVY (calculated)
-0.320
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGFPPWNCL PTGIAKIAAA AAVVVAALAS SGIALPRPRA APPPSGFGLL MSKAKVYTDV NVLRPKEYWD YEALTVQWGE QDDYEVVRKV GRGKYSEVFE
101: GINVNNNEKC IIKILKPVKK KKIKREIKIL QNLCGGPNIV KLLDIVRDQH SKTPSLIFEF VNNTDFKVLY PTLTDYDIRY YIYELLKALD YCHSQGIMHR
201: DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLVKI AKVLGTDGLN
301: SYLNKYHIEL DPQLEALVGR HSRKPWLKFM NGDNQHLVSP EAIDFLDKLL RYDHQDRLTA REAMAHPYFL QVRAVENSRT RAQ
101: GINVNNNEKC IIKILKPVKK KKIKREIKIL QNLCGGPNIV KLLDIVRDQH SKTPSLIFEF VNNTDFKVLY PTLTDYDIRY YIYELLKALD YCHSQGIMHR
201: DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLVKI AKVLGTDGLN
301: SYLNKYHIEL DPQLEALVGR HSRKPWLKFM NGDNQHLVSP EAIDFLDKLL RYDHQDRLTA REAMAHPYFL QVRAVENSRT RAQ
001: MHLIFFFSYF LRRYLLLLCA ILILRAPLAH SLIPPLTCVN TGTVESDVTG IRFDRCLDTD SLAKISLSTV MSKARVYTDV NVIRPKDYWD YESLNVQWGE
101: QDDYEVVRKV GRGKYSEVFE GINMNNNEKC IIKILKPVKK KKIRREIKIL QNLCGGPNIV KLLDVVRDQH SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY
201: YIYELLKALD FCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG
301: HDNQDQLVKI AKVLGTDELN AYLNKYQLEL DTQLEALVGR HSRKPWSKFI NADNRHLVSP EAIDYLDKLL RYDHQDRLTA KEAMAHPYFA QVRAAESSRM
401: RTQ
101: QDDYEVVRKV GRGKYSEVFE GINMNNNEKC IIKILKPVKK KKIRREIKIL QNLCGGPNIV KLLDVVRDQH SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY
201: YIYELLKALD FCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG
301: HDNQDQLVKI AKVLGTDELN AYLNKYQLEL DTQLEALVGR HSRKPWSKFI NADNRHLVSP EAIDYLDKLL RYDHQDRLTA KEAMAHPYFA QVRAAESSRM
401: RTQ
Arabidopsis Description
CKA2Casein kinase II subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q08466]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.