Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71648 | Canola | plastid | 59.88 | 63.98 |
| PGSC0003DMT400064191 | Potato | cytosol | 94.19 | 48.65 |
| CDY30613 | Canola | cytosol | 94.19 | 48.65 |
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 94.19 | 48.65 |
| Solyc03g044140.2.1 | Tomato | cytosol, nucleus | 94.19 | 48.65 |
| CDY57359 | Canola | cytosol | 93.6 | 48.49 |
| CDY57680 | Canola | cytosol | 93.6 | 48.35 |
| KRH28388 | Soybean | cytosol | 93.02 | 48.05 |
| KRH77093 | Soybean | nucleus | 93.02 | 48.05 |
| GSMUA_Achr6P16850_001 | Banana | cytosol | 92.44 | 47.75 |
| CDX83104 | Canola | cytosol | 91.28 | 47.72 |
| GSMUA_Achr10P... | Banana | cytosol | 91.86 | 47.45 |
| HORVU2Hr1G063420.1 | Barley | cytosol | 91.86 | 47.45 |
| TraesCS2D01G260500.1 | Wheat | cytosol | 91.86 | 47.45 |
| EER97857 | Sorghum | cytosol | 91.28 | 47.29 |
| Os07t0114400-01 | Rice | plasma membrane | 91.28 | 47.15 |
| GSMUA_Achr5P01690_001 | Banana | cytosol | 91.28 | 47.15 |
| TraesCS2A01G263400.1 | Wheat | cytosol, nucleus | 91.86 | 46.2 |
| Zm00001d007951_P001 | Maize | cytosol, nucleus | 88.37 | 45.78 |
| TraesCS4B01G254800.1 | Wheat | cytosol | 84.88 | 44.38 |
| TraesCS4A01G049900.1 | Wheat | cytosol | 84.3 | 43.67 |
| HORVU4Hr1G069390.1 | Barley | cytosol | 84.3 | 43.67 |
| Os03t0207300-01 | Rice | cytosol | 83.72 | 43.37 |
| TraesCS4D01G254600.1 | Wheat | cytosol | 83.72 | 43.37 |
| Bra036806.1-P | Field mustard | cytosol | 84.88 | 43.32 |
| TraesCS2B01G278700.2 | Wheat | cytosol | 91.28 | 41.53 |
| TraesCS5A01G400100.1 | Wheat | cytosol, mitochondrion | 91.86 | 41.47 |
| TraesCS5D01G410000.1 | Wheat | plastid | 91.86 | 41.47 |
| TraesCS5B01G404900.1 | Wheat | cytosol, mitochondrion | 91.86 | 41.47 |
| HORVU5Hr1G097230.1 | Barley | cytosol, plastid | 91.86 | 41.36 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 97.67 | 41.08 |
| Bra031829.1-P | Field mustard | cytosol | 65.12 | 40.88 |
| CDX76880 | Canola | cytosol, mitochondrion | 81.98 | 40.63 |
| Zm00001d034125_P002 | Maize | mitochondrion, plastid | 90.7 | 40.52 |
| EER90840 | Sorghum | plastid | 90.7 | 40.52 |
| KRH04471 | Soybean | nucleus | 93.02 | 40.2 |
| Zm00001d013217_P001 | Maize | cytosol | 88.95 | 39.95 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 92.44 | 39.26 |
| KRH58068 | Soybean | mitochondrion | 93.02 | 38.93 |
| Zm00001d018669_P004 | Maize | cytosol | 82.56 | 37.77 |
| CDY38928 | Canola | plastid | 79.07 | 33.92 |
| CDX89544 | Canola | plastid | 81.98 | 33.81 |
| CDY49445 | Canola | plastid | 81.98 | 33.49 |
| CDX98044 | Canola | cytosol | 30.23 | 32.5 |
| CDY67469 | Canola | vacuole | 52.91 | 31.06 |
| CDY15289 | Canola | vacuole | 48.84 | 30.43 |
| CDY29766 | Canola | golgi, plasma membrane | 56.4 | 27.4 |
| CDY10766 | Canola | extracellular, plasma membrane, vacuole | 34.88 | 26.79 |
| CDY52692 | Canola | cytosol, mitochondrion, nucleus | 16.86 | 25.66 |
| CDY69647 | Canola | cytosol | 36.63 | 18.53 |
| CDX77348 | Canola | plastid | 18.02 | 17.71 |
| CDY66894 | Canola | cytosol | 38.37 | 17.65 |
| CDY64921 | Canola | cytosol | 36.63 | 16.84 |
| CDY70859 | Canola | cytosol | 36.63 | 16.84 |
| CDX78886 | Canola | cytosol | 36.63 | 16.84 |
| CDY34051 | Canola | cytosol | 36.63 | 16.58 |
| CDX99437 | Canola | cytosol | 36.05 | 16.27 |
| CDX97773 | Canola | cytosol | 38.37 | 16.1 |
| CDX70574 | Canola | cytosol | 36.63 | 15.4 |
| CDX78587 | Canola | cytosol | 36.63 | 15.37 |
| CDX94939 | Canola | cytosol | 36.05 | 14.87 |
| CDX93471 | Canola | cytosol | 36.05 | 14.87 |
| CDY18828 | Canola | cytosol | 34.88 | 14.85 |
| CDX74129 | Canola | cytosol | 35.47 | 14.84 |
| CDY49981 | Canola | cytosol | 35.47 | 14.84 |
| CDX80585 | Canola | cytosol | 34.3 | 14.68 |
| CDX88238 | Canola | cytosol | 34.3 | 14.64 |
| CDY05202 | Canola | cytosol | 34.88 | 14.63 |
| CDY45686 | Canola | mitochondrion | 36.63 | 14.58 |
| CDX67856 | Canola | mitochondrion | 36.63 | 14.58 |
| CDX87033 | Canola | cytosol | 34.3 | 14.53 |
| CDY19757 | Canola | cytosol | 34.3 | 14.53 |
| CDY31060 | Canola | plastid | 35.47 | 14.49 |
| CDY65729 | Canola | plastid | 35.47 | 14.49 |
| CDY65303 | Canola | mitochondrion | 35.47 | 13.96 |
| CDY52332 | Canola | mitochondrion | 35.47 | 13.96 |
| CDX91895 | Canola | mitochondrion | 36.63 | 13.52 |
| CDX74346 | Canola | cytosol, mitochondrion | 36.05 | 13.25 |
| CDY07202 | Canola | mitochondrion | 36.05 | 13.16 |
| CDY51144 | Canola | mitochondrion | 36.05 | 12.97 |
| CDY25489 | Canola | golgi, plasma membrane | 34.3 | 12.14 |
| CDY27737 | Canola | cytosol | 34.88 | 11.67 |
| CDX78658 | Canola | cytosol, nucleus, peroxisome | 30.81 | 9.33 |
| CDY62551 | Canola | cytosol | 10.47 | 6.82 |
| CDY72370 | Canola | cytosol | 3.49 | 5.66 |
| Os03t0762000-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.9.1 | GO:A0A078JV05 | UniProt:A0A078JV05 | EnsemblPlants:CDY70654 | ProteinID:CDY70654 |
| ProteinID:CDY70654.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00005104001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PFscan:PS50011 | PANTHER:PTHR24054 | PANTHER:PTHR24054:SF33 | InterPro:Prot_kinase_dom | SMART:SM00220 |
| SUPFAM:SSF56112 | UniParc:UPI0004EE68B7 | : | : | : | : |
Description
BnaCnng69240DBnaCnng69240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JV05]
Coordinates
chrLK042828:+:881..2971
Molecular Weight (calculated)
20204.1 Da
IEP (calculated)
6.153
GRAVY (calculated)
-0.517
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRDLRLIDW GLAEFYHPGK EYNVRVASRY MPGPELLVDL QDYDYSLDMW SLGCMFAGMI FRKEPFFYGH DNQDQLVKIA KVLGTDELNA YLDKYQLELE
101: PQLEALVGRH SRKPWSKFIN ADNQHLVSPE AIDFLDKLLR YDHQDRLTAK EAMAHAYFAQ VRAAETSRMR SQ
101: PQLEALVGRH SRKPWSKFIN ADNQHLVSPE AIDFLDKLLR YDHQDRLTAK EAMAHAYFAQ VRAAETSRMR SQ
001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ
Arabidopsis Description
CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.