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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78886
CDX86939
CDX87230
CDX99437
CDY00245
CDY16798
CDY34051
CDY62551
CDY64921
CDY67247
CDY69647
CDY70859

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G18710.1 CDX78886 AT4G18710.1 18599455
AT4G18710.1 CDX99437 AT4G18710.1 18599455
AT4G18710.1 CDY34051 AT4G18710.1 18599455
AT4G18710.1 CDY62551 AT4G18710.1 18599455
AT4G18710.1 CDY64921 AT4G18710.1 18599455
AT4G18710.1 CDY69647 AT4G18710.1 18599455
AT4G18710.1 CDY70859 AT4G18710.1 18599455
AT4G18710.1 CDX86939 AT5G62000.1 18599455
AT4G18710.1 CDX87230 AT5G62000.1 18599455
AT4G18710.1 CDY00245 AT5G62000.1 18599455
AT4G18710.1 CDY16798 AT5G62000.1 18599455
AT4G18710.1 CDY67247 AT5G62000.1 18599455
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78886 Canola cytosol 99.12 90.11
CDY70859 Canola cytosol 98.82 89.84
CDY64921 Canola cytosol 98.24 89.3
Bra020994.1-P Field mustard cytosol 99.71 89.21
CDY34051 Canola cytosol 99.71 89.21
AT4G18710.1 Thale cress cytosol 98.53 88.16
CDX99437 Canola cytosol 98.53 87.93
Os01t0205700-01 Rice cytosol 58.53 85.41
CDY62551 Canola cytosol 65.0 83.71
VIT_10s0003g01480.t01 Wine grape cytosol 90.88 81.32
KRH61707 Soybean cytosol 90.29 80.79
KRH21245 Soybean cytosol 88.82 80.75
Solyc02g072300.2.1 Tomato cytosol 90.29 80.37
PGSC0003DMT400073091 Potato cytosol 90.29 80.37
KRH52380 Soybean cytosol 89.12 79.74
KRH11042 Soybean cytosol 88.53 79.21
CDY66894 Canola cytosol 86.76 78.88
CDY52692 Canola cytosol, mitochondrion, nucleus 26.18 78.76
Solyc03g006070.2.1 Tomato cytosol 88.24 78.53
PGSC0003DMT400068764 Potato cytosol 88.24 78.53
TraesCS3A01G136500.1 Wheat cytosol 87.06 78.31
CDY10766 Canola extracellular, plasma membrane, vacuole 50.88 77.23
TraesCS3D01G137200.1 Wheat cytosol 86.76 73.57
Os05t0207500-01 Rice cytosol 86.18 72.89
EES00093 Sorghum cytosol 86.18 72.52
TraesCS1A01G125000.1 Wheat cytosol 85.29 72.14
TraesCS1B01G142300.1 Wheat cytosol 85.29 72.14
TraesCS1D01G129000.2 Wheat cytosol 85.29 72.14
KRH42881 Soybean cytosol 81.18 72.06
KRH58985 Soybean cytosol 81.18 72.06
CDX97773 Canola cytosol 86.76 71.95
Zm00001d008893_P001 Maize cytosol 85.88 71.92
HORVU3Hr1G026020.3 Barley mitochondrion 87.06 71.5
Zm00001d039407_P001 Maize cytosol 85.88 68.07
CDY72370 Canola cytosol 20.88 66.98
HORVU6Hr1G046490.1 Barley cytosol 24.71 66.67
CDX70574 Canola cytosol 79.71 66.26
CDX78587 Canola cytosol 79.71 66.1
CDX80585 Canola cytosol 76.76 64.93
HORVU6Hr1G008360.2 Barley mitochondrion, peroxisome, plasma membrane 42.94 64.89
CDX88238 Canola cytosol 76.47 64.52
CDY05202 Canola cytosol 77.65 64.39
CDY19757 Canola cytosol 76.76 64.29
CDX87033 Canola cytosol 76.76 64.29
CDY49981 Canola cytosol 76.76 63.5
CDX74129 Canola cytosol 76.76 63.5
HORVU2Hr1G051860.1 Barley cytosol 31.18 63.1
CDY18828 Canola cytosol 73.24 61.63
CDY65729 Canola plastid 71.18 57.48
CDY31060 Canola plastid 71.18 57.48
CDX94939 Canola cytosol 69.41 56.59
CDX93471 Canola cytosol 69.41 56.59
CDX77348 Canola plastid 28.53 55.43
CDX67856 Canola mitochondrion 69.71 54.86
CDY45686 Canola mitochondrion 69.71 54.86
CDX91895 Canola mitochondrion 74.41 54.29
CDY52332 Canola mitochondrion 69.71 54.23
CDX74346 Canola cytosol, mitochondrion 74.41 54.06
CDY65303 Canola mitochondrion 69.12 53.78
CDY07202 Canola mitochondrion 73.82 53.29
CDY51144 Canola mitochondrion 74.41 52.93
CDY27737 Canola cytosol 77.65 51.36
TraesCS5A01G259000.1 Wheat endoplasmic reticulum, extracellular, plastid 14.71 43.48
TraesCS1B01G361800.1 Wheat endoplasmic reticulum, extracellular, plastid 14.41 42.61
CDX78658 Canola cytosol, nucleus, peroxisome 70.29 42.08
TraesCS5B01G230700.1 Wheat endoplasmic reticulum, extracellular, plastid 14.12 41.03
TraesCS4A01G365100.1 Wheat endoplasmic reticulum, extracellular, plastid 13.82 40.17
CDY70654 Canola cytosol 18.53 36.63
CDY30613 Canola cytosol 27.65 28.23
CDY57359 Canola cytosol 27.35 28.01
CDX83104 Canola cytosol 27.06 27.96
CDY57680 Canola cytosol 27.35 27.93
CDY71648 Canola plastid 12.94 27.33
CDX76880 Canola cytosol, mitochondrion 26.76 26.22
CDX98044 Canola cytosol 12.06 25.62
CDY38928 Canola plastid 26.47 22.44
CDX89544 Canola plastid 27.06 22.06
CDY49445 Canola plastid 26.76 21.62
CDY67469 Canola vacuole 16.47 19.11
CDY15289 Canola vacuole 14.71 18.12
CDY29766 Canola golgi, plasma membrane 17.94 17.23
CDY25489 Canola golgi, plasma membrane 16.18 11.32
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.3MapMan:18.4.3.4Gene3D:3.30.200.20GO:A0A078JVS8UniProt:A0A078JVS8
EnsemblPlants:CDY69647ProteinID:CDY69647ProteinID:CDY69647.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00089574001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24057PANTHER:PTHR24057:SF12InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE7500::
Description
BnaAnng31110DBnaAnng31110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVS8]
Coordinates
chrLK039944:-:351..3044
Molecular Weight (calculated)
38994.6 Da
IEP (calculated)
8.535
GRAVY (calculated)
-0.155
Length
340 amino acids
Sequence
(BLAST)
001: MAERVVGTGS FGIVFQAKCL ETGETVAIKK VLQDRRYKNR ELQLMRVMDH PNVVCLKHCF FSTTSKDELF LNLVMEYVPE SLYRVLKHYS TANQRMPLVY
101: VKLYMYQIFR GLAYMHNVAE VCHRDLKPQN LLVDPLTHQV KICDFGSAKQ LVKGEANISY ICSRFYRAPE LIFGATEYTT SIDIWSAGCV LAELLLGQPL
201: FPGENAVDQL VEIIKVLGTP TREEIRCMNP HYTDFRFPQI KAHPWHKIFH KRMPPEAIDF ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPF
301: PPIFNFKQEV AGASPELVNK LIPDHIKRQL GLSFLNQSGT
Best Arabidopsis Sequence Match ( AT1G06390.1 )
(BLAST)
001: MASLPLGPQP HALAPPLQLH DGDALKRRPE LDSDKEMSAA VIEGNDAVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGESVAIKK
101: VLQDRRYKNR ELQLMRPMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLRHYT SSNQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFNELREP NARLPNGRPL PPLFNFKQEL GGASMELINR LIPEHVRRQM
401: STGLQNS
Arabidopsis Description
ASK9SK22 [Source:UniProtKB/TrEMBL;Acc:A0A178WCN5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.