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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73319
CDY28412

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G14640.1 CDX73319 AT1G35210.1 21798944
AT5G14640.1 CDY28412 AT1G35210.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006263.1-P Field mustard cytosol 98.54 98.54
CDX70574 Canola cytosol 98.29 98.53
AT5G14640.1 Thale cress cytosol 96.59 96.59
VIT_14s0066g01050.t01 Wine grape cytosol 89.02 88.59
Solyc12g062870.1.1 Tomato cytosol 87.56 87.56
PGSC0003DMT400080607 Potato cytosol 87.56 87.56
CDX80585 Canola cytosol 85.37 87.06
CDX88238 Canola cytosol 85.37 86.85
Solyc02g086670.2.1 Tomato cytosol 85.37 86.63
PGSC0003DMT400001392 Potato cytosol 85.85 85.85
CDY19757 Canola cytosol 84.63 85.47
CDX87033 Canola cytosol 84.63 85.47
CDX74129 Canola cytosol 83.9 83.7
CDY49981 Canola cytosol 83.9 83.7
CDY05202 Canola cytosol 83.41 83.41
CDY66894 Canola cytosol 73.41 80.48
CDX78886 Canola cytosol 73.17 80.21
CDY72370 Canola cytosol 20.73 80.19
CDY70859 Canola cytosol 72.93 79.95
CDY69647 Canola cytosol 66.1 79.71
CDY64921 Canola cytosol 72.44 79.41
CDX99437 Canola cytosol 73.66 79.27
CDY34051 Canola cytosol 73.17 78.95
CDY18828 Canola cytosol 77.56 78.71
CDY10766 Canola extracellular, plasma membrane, vacuole 40.98 75.0
CDX97773 Canola cytosol 74.63 74.63
CDY62551 Canola cytosol 48.05 74.62
CDY65729 Canola plastid 73.9 71.97
CDY31060 Canola plastid 73.66 71.73
CDX94939 Canola cytosol 72.44 71.22
CDX93471 Canola cytosol 72.44 71.22
CDY52692 Canola cytosol, mitochondrion, nucleus 19.51 70.8
CDX77348 Canola plastid 28.54 66.86
CDY27737 Canola cytosol 82.93 66.15
CDX91895 Canola mitochondrion 74.88 65.88
CDX74346 Canola cytosol, mitochondrion 74.88 65.6
CDX67856 Canola mitochondrion 68.78 65.28
CDY45686 Canola mitochondrion 68.78 65.28
CDY07202 Canola mitochondrion 74.88 65.18
CDY52332 Canola mitochondrion 69.02 64.76
CDY51144 Canola mitochondrion 75.37 64.64
CDY65303 Canola mitochondrion 68.05 63.84
CDX78658 Canola cytosol, nucleus, peroxisome 81.46 58.8
CDY70654 Canola cytosol 15.37 36.63
CDY30613 Canola cytosol 26.1 32.13
CDY57359 Canola cytosol 25.85 31.93
CDX83104 Canola cytosol 25.61 31.91
CDY57680 Canola cytosol 25.85 31.83
CDX76880 Canola cytosol, mitochondrion 25.12 29.68
CDX98044 Canola cytosol 11.22 28.75
CDY38928 Canola plastid 25.37 25.94
CDX89544 Canola plastid 26.1 25.66
CDY71648 Canola plastid 10.0 25.47
CDY49445 Canola plastid 25.85 25.18
CDY15289 Canola vacuole 15.61 23.19
CDY67469 Canola vacuole 16.34 22.87
CDY29766 Canola golgi, plasma membrane 18.78 21.75
CDY25489 Canola golgi, plasma membrane 17.32 14.61
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.3MapMan:18.4.3.4Gene3D:3.30.200.20GO:A0A078CPD9EnsemblPlants:CDX78587
ProteinID:CDX78587ProteinID:CDX78587.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00129998001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24057
PANTHER:PTHR24057:SF36InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEB21A:::::
Description
BnaA03g04990D
Coordinates
chrLK031815:-:1410013..1412864
Molecular Weight (calculated)
46093.0 Da
IEP (calculated)
8.518
GRAVY (calculated)
-0.250
Length
410 amino acids
Sequence
(BLAST)
001: MASVGTLPSS TMATKQNNAS LCVDKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKDGQPKQ TISYMAERVV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PMIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTAIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLASRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRPLPPLFNF KPQELKGASV ELLSKLIPDH
401: ARKQCSFLAV
Best Arabidopsis Sequence Match ( AT5G14640.1 )
(BLAST)
001: MASVGTLPAS SMATKQSNAS ICAEKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKNGQPKQ TISYMAERIV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PIIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTTIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLVSRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRALPPLFNF KPQELKGASL ELLSKLIPDH
401: ARKQCSFLAL
Arabidopsis Description
ASK5Shaggy-related protein kinase epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8VZD5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.