Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78886
CDX86939
CDX87230
CDX99437
CDY00245
CDY16798
CDY34051
CDY62551
CDY64921
CDY67247
CDY69647
CDY70859

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G18710.1 CDX78886 AT4G18710.1 18599455
AT4G18710.1 CDX99437 AT4G18710.1 18599455
AT4G18710.1 CDY34051 AT4G18710.1 18599455
AT4G18710.1 CDY62551 AT4G18710.1 18599455
AT4G18710.1 CDY64921 AT4G18710.1 18599455
AT4G18710.1 CDY69647 AT4G18710.1 18599455
AT4G18710.1 CDY70859 AT4G18710.1 18599455
AT4G18710.1 CDX86939 AT5G62000.1 18599455
AT4G18710.1 CDX87230 AT5G62000.1 18599455
AT4G18710.1 CDY00245 AT5G62000.1 18599455
AT4G18710.1 CDY16798 AT5G62000.1 18599455
AT4G18710.1 CDY67247 AT5G62000.1 18599455
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013341.1-P Field mustard cytosol 100.0 100.0
CDY70859 Canola cytosol 99.47 99.47
CDY69647 Canola cytosol 90.11 99.12
CDY64921 Canola cytosol 98.93 98.93
AT4G18710.1 Thale cress cytosol 99.47 97.89
CDY62551 Canola cytosol 68.98 97.73
CDX99437 Canola cytosol 99.47 97.64
CDY34051 Canola cytosol 98.93 97.37
VIT_10s0003g01480.t01 Wine grape cytosol 91.18 89.74
KRH21245 Soybean cytosol 88.24 88.24
KRH61707 Soybean cytosol 89.57 88.16
Solyc02g072300.2.1 Tomato cytosol 89.84 87.96
PGSC0003DMT400073091 Potato cytosol 89.84 87.96
CDY66894 Canola cytosol 87.43 87.43
KRH52380 Soybean cytosol 88.5 87.11
Os01t0205700-01 Rice cytosol 54.01 86.7
KRH11042 Soybean cytosol 87.97 86.58
Solyc03g006070.2.1 Tomato cytosol 87.17 85.34
PGSC0003DMT400068764 Potato cytosol 87.17 85.34
TraesCS3A01G136500.1 Wheat cytosol 86.1 85.19
Os05t0207500-01 Rice cytosol 85.83 79.85
CDX97773 Canola cytosol 87.43 79.76
CDY52692 Canola cytosol, mitochondrion, nucleus 24.06 79.65
EES00093 Sorghum cytosol 85.56 79.21
TraesCS1A01G125000.1 Wheat cytosol 85.03 79.1
TraesCS1B01G142300.1 Wheat cytosol 85.03 79.1
TraesCS1D01G129000.2 Wheat cytosol 85.03 79.1
CDY10766 Canola extracellular, plasma membrane, vacuole 47.33 79.02
Zm00001d008893_P001 Maize cytosol 85.29 78.57
KRH42881 Soybean cytosol 80.21 78.33
KRH58985 Soybean cytosol 80.21 78.33
HORVU3Hr1G026020.3 Barley mitochondrion 86.1 77.78
TraesCS3D01G137200.1 Wheat cytosol 81.82 76.31
Zm00001d039407_P001 Maize cytosol 85.29 74.36
CDX70574 Canola cytosol 80.21 73.35
CDX78587 Canola cytosol 80.21 73.17
HORVU6Hr1G046490.1 Barley cytosol 24.33 72.22
CDX80585 Canola cytosol 77.27 71.89
CDX88238 Canola cytosol 77.01 71.46
CDX87033 Canola cytosol 77.01 70.94
CDY19757 Canola cytosol 77.01 70.94
CDY05202 Canola cytosol 77.54 70.73
CDX74129 Canola cytosol 76.74 69.83
CDY49981 Canola cytosol 76.74 69.83
HORVU6Hr1G008360.2 Barley mitochondrion, peroxisome, plasma membrane 40.91 68.0
HORVU2Hr1G051860.1 Barley cytosol 30.21 67.26
CDY72370 Canola cytosol 18.98 66.98
CDY18828 Canola cytosol 72.19 66.83
CDY65729 Canola plastid 68.98 61.28
CDY31060 Canola plastid 68.72 61.05
CDX94939 Canola cytosol 67.65 60.67
CDX93471 Canola cytosol 67.65 60.67
CDX91895 Canola mitochondrion 72.99 58.58
CDX74346 Canola cytosol, mitochondrion 72.99 58.33
CDY45686 Canola mitochondrion 67.11 58.1
CDX67856 Canola mitochondrion 67.11 58.1
CDY07202 Canola mitochondrion 72.73 57.75
CDY52332 Canola mitochondrion 67.11 57.44
CDY51144 Canola mitochondrion 73.26 57.32
CDY65303 Canola mitochondrion 66.58 56.98
CDY27737 Canola cytosol 77.54 56.42
CDX77348 Canola plastid 26.2 56.0
CDX78658 Canola cytosol, nucleus, peroxisome 71.39 47.01
TraesCS5A01G259000.1 Wheat endoplasmic reticulum, extracellular, plastid 13.37 43.48
TraesCS1B01G361800.1 Wheat endoplasmic reticulum, extracellular, plastid 13.1 42.61
TraesCS5B01G230700.1 Wheat endoplasmic reticulum, extracellular, plastid 13.1 41.88
TraesCS4A01G365100.1 Wheat endoplasmic reticulum, extracellular, plastid 12.83 41.03
CDY70654 Canola cytosol 16.84 36.63
CDY30613 Canola cytosol 26.2 29.43
CDY57359 Canola cytosol 25.94 29.22
CDX83104 Canola cytosol 25.67 29.18
CDY57680 Canola cytosol 25.94 29.13
CDX76880 Canola cytosol, mitochondrion 25.4 27.38
CDY71648 Canola plastid 11.76 27.33
CDX98044 Canola cytosol 11.23 26.25
CDY38928 Canola plastid 25.13 23.44
CDX89544 Canola plastid 25.67 23.02
CDY49445 Canola plastid 25.4 22.57
CDY67469 Canola vacuole 15.51 19.8
CDY15289 Canola vacuole 14.17 19.2
CDY29766 Canola golgi, plasma membrane 17.11 18.08
CDY25489 Canola golgi, plasma membrane 15.78 12.14
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.3MapMan:18.4.3.4Gene3D:3.30.200.20GO:A0A078CNT4EnsemblPlants:CDX78886
ProteinID:CDX78886ProteinID:CDX78886.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00131365001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR24057PANTHER:PTHR24057:SF12InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI000254626C::::
Description
BnaA01g09530D
Coordinates
chrLK031816:+:634852..637663
Molecular Weight (calculated)
42409.6 Da
IEP (calculated)
8.532
GRAVY (calculated)
-0.154
Length
374 amino acids
Sequence
(BLAST)
001: MPAAVVDGHD QVTGHIISTT IGGKNGEPKQ TISYMAERVV GTGSFGIVFQ AKCLETGETV AIKKVLQDRR YKNRELQLMR VMDHPNVVCL KHCFFSTTSK
101: DELFLNLVME YVPESLYRVL KHYSTANQRM PLVYVKLYMY QIFRGLAYIH NVAGVCHRDL KPQNLLVDPL THQVKICDFG SAKQLVKGEA NISYICSRFY
201: RAPELIFGAT EYTTSIDIWS AGCVLAELLL GQPLFPGENA VDQLVEIIKV LGTPTREEIR CMNPHYTDFR FPQIKAHPWH KIFHKRMPPE AIDFASRLLQ
301: YSPSLRCTAL EACAHPFFDE LREPNARLPN GRPFPPLFNF KQEVAGASPE LVNKLIPDHI KRQLGLSFLN QSGT
Best Arabidopsis Sequence Match ( AT4G18710.1 )
(BLAST)
001: MADDKEMPAA VVDGHDQVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGETVAIKK VLQDRRYKNR ELQLMRVMDH PNVVCLKHCF
101: FSTTSKDELF LNLVMEYVPE SLYRVLKHYS SANQRMPLVY VKLYMYQIFR GLAYIHNVAG VCHRDLKPQN LLVDPLTHQV KICDFGSAKQ LVKGEANISY
201: ICSRFYRAPE LIFGATEYTT SIDIWSAGCV LAELLLGQPL FPGENAVDQL VEIIKVLGTP TREEIRCMNP HYTDFRFPQI KAHPWHKIFH KRMPPEAIDF
301: ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPF PPLFNFKQEV AGSSPELVNK LIPDHIKRQL GLSFLNQSGT
Arabidopsis Description
ASK7Shaggy-related protein kinase eta [Source:UniProtKB/Swiss-Prot;Acc:Q39011]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.