Factsheet for VIT_10s0003g01480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_10s0003g01480.t01
VIT_17s0000g00320.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18710.1	VIT_10s0003g01480.t01	AT4G18710.1	18599455
AT4G18710.1	VIT_17s0000g00320.t01	AT5G62000.1	18599455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013341.1-P	Field mustard	cytosol	89.74	91.18
CDX78886	Canola	cytosol	89.74	91.18
PGSC0003DMT400073091	Potato	cytosol	91.58	91.1
Solyc02g072300.2.1	Tomato	cytosol	91.58	91.1
CDY70859	Canola	cytosol	89.47	90.91
CDY69647	Canola	cytosol	81.32	90.88
KRH61707	Soybean	cytosol	90.79	90.79
AT4G18710.1	Thale cress	cytosol	90.79	90.79
Bra012581.1-P	Field mustard	cytosol	89.21	90.64
CDY64921	Canola	cytosol	88.95	90.37
CDY34051	Canola	cytosol	90.26	90.26
CDX99437	Canola	cytosol	90.26	90.03
Bra020994.1-P	Field mustard	cytosol	90.0	90.0
KRH21245	Soybean	cytosol	88.42	89.84
KRH52380	Soybean	cytosol	89.74	89.74
KRH11042	Soybean	cytosol	89.47	89.47
Solyc03g006070.2.1	Tomato	cytosol	88.42	87.96
PGSC0003DMT400068764	Potato	cytosol	88.42	87.96
Os01t0205700-01	Rice	cytosol	53.68	87.55
TraesCS3A01G136500.1	Wheat	cytosol	86.58	87.04
CDY62551	Canola	cytosol	60.26	86.74
VIT_12s0028g01810.t01	Wine grape	cytosol	89.74	84.83
Os05t0207500-01	Rice	cytosol	87.89	83.08
TraesCS1D01G129000.2	Wheat	cytosol	87.37	82.59
TraesCS1B01G142300.1	Wheat	cytosol	87.37	82.59
TraesCS1A01G125000.1	Wheat	cytosol	87.37	82.59
EES00093	Sorghum	cytosol	86.05	80.94
KRH42881	Soybean	cytosol	81.05	80.42
Zm00001d008893_P001	Maize	cytosol	85.79	80.3
KRH58985	Soybean	cytosol	80.79	80.16
HORVU3Hr1G026020.3	Barley	mitochondrion	86.58	79.47
VIT_07s0005g02100.t01	Wine grape	cytosol	78.68	78.48
VIT_14s0060g00600.t01	Wine grape	cytosol	77.89	77.69
TraesCS3D01G137200.1	Wheat	cytosol	81.84	77.56
VIT_15s0045g00420.t01	Wine grape	cytosol	8.42	76.19
Zm00001d039407_P001	Maize	cytosol	85.26	75.52
VIT_14s0066g01050.t01	Wine grape	cytosol	81.05	74.76
HORVU6Hr1G046490.1	Barley	cytosol	24.47	73.81
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	41.32	69.78
HORVU2Hr1G051860.1	Barley	cytosol	29.74	67.26
VIT_12s0035g01060.t01	Wine grape	cytosol	71.84	64.69
VIT_15s0048g02010.t01	Wine grape	cytosol, mitochondrion	73.95	60.04
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	14.47	47.83
TraesCS1B01G361800.1	Wheat	endoplasmic reticulum, extracellular, plastid	14.21	46.96
TraesCS5B01G230700.1	Wheat	endoplasmic reticulum, extracellular, plastid	13.95	45.3
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	13.68	44.44
VIT_18s0001g09320.t01	Wine grape	cytosol	27.37	31.23
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	27.89	26.17
VIT_07s0129g00270.t01	Wine grape	mitochondrion	27.63	24.76

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100855030	wikigene:100855030	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20
ProteinID:CBI30705	ProteinID:CBI30705.3	UniProt:D7TJN3	EMBL:FN595992	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653
GO:GO:0009719	GO:GO:0009729	GO:GO:0009733	GO:GO:0009742	GO:GO:0009825	GO:GO:0009965
GO:GO:0009987	GO:GO:0016020	GO:GO:0016049	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0030154	GO:GO:0040007	GO:GO:0042802	GO:GO:0046777	GO:GO:0046827	GO:GO:0048765
GO:GO:1900458	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100855030	wikigene:LOC100855030	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF12
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC54878
TIGR:TC57046	UniParc:UPI0001983FD2	ArrayExpress:VIT_10s0003g01480	EnsemblPlantsGene:VIT_10s0003g01480	EnsemblPlants:VIT_10s0003g01480.t01	unigene:Vvi.3313
RefSeq:XP_003633016	RefSeq:XP_003633016.1	:	:	:	:

Description

No Description!

Coordinates

chr10:+:2888644..2893624

Molecular Weight (calculated)

43036.3 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.195

Length

380 amino acids

Sequence
(BLAST)

001: MSDDKEISAP VVDGNDPVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGETVAIKK VLQDRRYKNR ELQLMRTMDH PNVISLKHCF
101: FSTTSRDELF LNLVMEYVPE TMYRVLKHYS NAKQRMPLIY VKLYTYQIFR GLAYIHSVPG VCHRDLKPQN LLVDPLTHQV KLCDFGSAKV LVKGEANISY
201: ICSRFYRAPE LIFGATEYTT SIDIWSAGCV LAELLLGQPL FPGENAVDQL VEIIKVLGTP TREEIRCMNP SYTDFRFPQI KAHPWHKVFH KRMPPEAIDL
301: ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPL PPLFNFKQEL SGASPELVNK LIPEHVRRQI GLSFFHPAGT

Best Arabidopsis Sequence Match ( AT4G18710.1 )
(BLAST)

001: MADDKEMPAA VVDGHDQVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGETVAIKK VLQDRRYKNR ELQLMRVMDH PNVVCLKHCF
101: FSTTSKDELF LNLVMEYVPE SLYRVLKHYS SANQRMPLVY VKLYMYQIFR GLAYIHNVAG VCHRDLKPQN LLVDPLTHQV KICDFGSAKQ LVKGEANISY
201: ICSRFYRAPE LIFGATEYTT SIDIWSAGCV LAELLLGQPL FPGENAVDQL VEIIKVLGTP TREEIRCMNP HYTDFRFPQI KAHPWHKIFH KRMPPEAIDF
301: ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPF PPLFNFKQEV AGSSPELVNK LIPDHIKRQL GLSFLNQSGT

Arabidopsis Description

ASK7Shaggy-related protein kinase eta [Source:UniProtKB/Swiss-Prot;Acc:Q39011]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.