Factsheet for VIT_14s0060g00600.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g05810.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05840.1	VIT_01s0011g05810.t01	AT1G68050.1	14749489

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g02100.t01	Wine grape	cytosol	94.23	94.23
KRH68409	Soybean	cytosol	96.33	90.39
KRG96686	Soybean	cytosol	96.06	90.15
AT5G26751.1	Thale cress	cytosol	94.75	89.14
CDX88238	Canola	cytosol	94.23	89.08
Bra009916.1-P	Field mustard	cytosol	94.23	89.08
CDX80585	Canola	cytosol	93.96	89.05
KRH33767	Soybean	cytosol	95.8	89.02
CDX87033	Canola	cytosol	93.7	87.93
Bra036593.1-P	Field mustard	cytosol	93.7	87.93
CDY19757	Canola	cytosol	93.7	87.93
PGSC0003DMT400007088	Potato	cytosol	93.96	87.53
Solyc01g101000.2.1	Tomato	cytosol	93.7	87.29
AT3G05840.1	Thale cress	cytosol	93.18	86.8
Bra039407.1-P	Field mustard	cytosol	92.65	86.1
Bra001169.1-P	Field mustard	cytosol	92.39	85.85
CDY05202	Canola	cytosol	92.39	85.85
KRG90477	Soybean	cytosol	95.8	85.68
CDY49981	Canola	cytosol	92.39	85.64
CDX74129	Canola	cytosol	92.39	85.64
VIT_14s0066g01050.t01	Wine grape	cytosol	90.29	83.5
VIT_15s0045g00420.t01	Wine grape	cytosol	9.19	83.33
TraesCS4A01G361100.1	Wheat	cytosol	88.45	82.6
HORVU5Hr1G117030.1	Barley	cytosol	88.45	82.6
TraesCS5B01G511800.1	Wheat	cytosol	88.45	82.4
TraesCS5D01G512300.2	Wheat	cytosol	88.45	81.8
CDY18828	Canola	cytosol	85.3	80.45
Bra040251.1-P	Field mustard	cytosol	81.1	80.05
VIT_10s0003g01480.t01	Wine grape	cytosol	77.69	77.89
VIT_12s0035g01060.t01	Wine grape	cytosol	80.31	72.51
VIT_12s0028g01810.t01	Wine grape	cytosol	75.59	71.64
CDY27737	Canola	cytosol	92.39	68.48
VIT_15s0048g02010.t01	Wine grape	cytosol, mitochondrion	80.58	65.6
VIT_18s0001g09320.t01	Wine grape	cytosol	27.3	31.23
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	28.08	26.42
VIT_07s0129g00270.t01	Wine grape	mitochondrion	27.3	24.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100258056	wikigene:100258056	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20
ProteinID:CBI39647	ProteinID:CBI39647.3	UniProt:D7UA83	EMBL:FN596746	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100258056	wikigene:LOC100258056	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF35	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC61706	UniParc:UPI0001BE4D0C
ArrayExpress:VIT_14s0060g00600	EnsemblPlantsGene:VIT_14s0060g00600	EnsemblPlants:VIT_14s0060g00600.t01	unigene:Vvi.274	RefSeq:XP_002280673	RefSeq:XP_002280673.1

Description

No Description!

Coordinates

chr14:+:531378..537439

Molecular Weight (calculated)

43650.3 Da

IEP (calculated)

8.864

GRAVY (calculated)

-0.246

Length

381 amino acids

Sequence
(BLAST)

001: MNDMKIRDDK EMEATVVDGN GTETGHIIVT TIGGRNGQPK QTISYMAERV VGHGSFGVVF QAKCLETGET VAIKKVLQDK RYKNRELQTM RLLDHPNVVS
101: LKHCFFSTTE KDELYLNLVL EYVPETVHRV IKHYNKLNQR MPLIYVKLYT YQIFRALSYI HRSIGVCHRD IKPQNLLVNP HTHQLKLCDF GSAKVLVKGE
201: PNISYICSRY YRAPELIFGA TEYTTAIDIW SAGCVLAELM LGQPLFPGES GVDQLVEIIK VLGTPTREEI KCMNPNYTEF KFPQIKAHPW HKIFHKRMPP
301: EAVDLVSRLL QYSPNLRCTA MDALTHSFFD ELRDSSTRLP NGRFLPPLFN FKPHELKGVP VEILVKLIPE HARKQCPFLG L

Best Arabidopsis Sequence Match ( AT5G26751.1 )
(BLAST)

001: MASVGIAPNP GARDSTGVDK LPEEMNDMKI RDDKEMEATV VDGNGTETGH IIVTTIGGRN GQPKQTISYM AERVVGHGSF GVVFQAKCLE TGETVAIKKV
101: LQDRRYKNRE LQTMRLLDHP NVVSLKHCFF STTEKDELYL NLVLEYVPET VHRVIKHYNK LNQRMPLIYV KLYTYQIFRA LSYIHRCIGV CHRDIKPQNL
201: LVNPHTHQVK LCDFGSAKVL VKGEPNISYI CSRYYRAPEL IFGATEYTTA IDVWSAGCVL AELLLGQPLF PGESGVDQLV EIIKVLGTPT REEIKCMNPN
301: YTEFKFPQIK AHPWHKIFHK RMPPEAVDLV SRLLQYSPNL RSAALDTLVH PFFDELRDPN ARLPNGRFLP PLFNFKPHEL KGVPLEMVAK LVPEHARKQC
401: PWLGL

Arabidopsis Description

ASK1Shaggy-related protein kinase alpha [Source:UniProtKB/Swiss-Prot;Acc:P43288]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.