CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH41723
KRH60424

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05840.1	KRH41723	AT1G68050.1	14749489
AT3G05840.1	KRH60424	AT1G68050.1	14749489

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68409	Soybean	cytosol	99.26	99.26
VIT_14s0060g00600.t01	Wine grape	cytosol	90.15	96.06
KRH33767	Soybean	cytosol	96.8	95.85
PGSC0003DMT400007088	Potato	cytosol	94.58	93.89
Solyc01g101000.2.1	Tomato	cytosol	94.33	93.64
AT5G26751.1	Thale cress	cytosol	92.86	93.09
CDX88238	Canola	cytosol	91.63	92.31
Bra009916.1-P	Field mustard	cytosol	91.63	92.31
CDX80585	Canola	cytosol	91.38	92.29
KRG90477	Soybean	cytosol	95.81	91.31
CDX87033	Canola	cytosol	91.13	91.13
CDY19757	Canola	cytosol	91.13	91.13
Bra036593.1-P	Field mustard	cytosol	91.13	91.13
AT3G05840.1	Thale cress	cytosol	91.38	90.71
Bra001169.1-P	Field mustard	cytosol	91.13	90.24
CDX74129	Canola	cytosol	90.89	89.78
CDY49981	Canola	cytosol	90.89	89.78
CDY05202	Canola	cytosol	90.39	89.51
Bra039407.1-P	Field mustard	cytosol	89.9	89.02
KRH31752	Soybean	cytosol	88.42	87.78
HORVU5Hr1G117030.1	Barley	cytosol	86.95	86.52
TraesCS4A01G361100.1	Wheat	cytosol	86.7	86.27
TraesCS5B01G511800.1	Wheat	cytosol	86.7	86.06
TraesCS5D01G512300.2	Wheat	cytosol	86.7	85.44
CDY18828	Canola	cytosol	83.0	83.42
Bra040251.1-P	Field mustard	cytosol	79.06	83.16
KRH69166	Soybean	cytosol	88.67	79.82
KRH26299	Soybean	cytosol	77.59	75.0
KRH21245	Soybean	cytosol	68.47	74.33
KRH06055	Soybean	cytosol	76.85	74.29
KRH61707	Soybean	cytosol	69.46	74.21
KRH52380	Soybean	cytosol	69.21	73.95
KRH11042	Soybean	cytosol	68.97	73.68
KRH25797	Soybean	cytosol	74.38	71.9
KRH55721	Soybean	cytosol	74.14	71.84
CDY27737	Canola	cytosol	90.15	71.21
KRH27067	Soybean	cytosol	71.18	70.66
KRH22265	Soybean	cytosol	71.92	70.02
KRH42881	Soybean	cytosol	64.53	68.41
KRH58985	Soybean	cytosol	64.29	68.15
KRH48234	Soybean	cytosol, mitochondrion	78.82	68.09
KRH65140	Soybean	mitochondrion	77.34	66.81
KRH40543	Soybean	mitochondrion	75.12	66.3
KRH00638	Soybean	mitochondrion	74.88	65.1
KRH75231	Soybean	cytosol	15.52	63.0
KRH62838	Soybean	cytosol, mitochondrion	11.82	58.54
KRH21176	Soybean	cytosol	36.7	57.31
KRH70115	Soybean	cytosol	44.83	52.45
KRH12527	Soybean	cytosol, endoplasmic reticulum, plasma membrane	21.18	37.89
KRH32741	Soybean	mitochondrion	21.18	37.89
KRH58078	Soybean	cytosol	1.48	31.58
KRH77093	Soybean	nucleus	25.37	30.93
KRH28388	Soybean	cytosol	25.37	30.93
KRH04448	Soybean	nucleus	25.86	30.26
KRH04471	Soybean	nucleus	26.11	26.63
KRH58076	Soybean	endoplasmic reticulum	25.37	26.28
KRH58068	Soybean	mitochondrion	26.11	25.79

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100795659	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	EMBL:ACUP02012162
EnsemblPlantsGene:GLYMA_19G226400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1NBN8	InterPro:IPR000719
EnsemblPlants:KRG96686	ProteinID:KRG96686	ProteinID:KRG96686.1	ProteinID:KRG96687.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF35	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233E601	:

Description

hypothetical protein

Coordinates

chr19:+:47816881..47821459

Molecular Weight (calculated)

46248.4 Da

IEP (calculated)

8.465

GRAVY (calculated)

-0.229

Length

406 amino acids

Sequence
(BLAST)

001: MASVGVAPTS SGLRESSGVD RLPEEMNDMR IRDDKEMEAT VVDGNGTETG HIIVTTIGGR NGQPKQTISY MAERIVGHGS FGVVFQAKCL ETGETVAIKK
101: VLQDKRYKNR ELQTMRLLDH PNVVCLKHCF FSTTEKDELY LNLVLEYVPE TVNRVIKHYN KLNQRMPLIY VKLYTYQIFR ALSYIHRCIG VCHRDIKPQN
201: LLVNPHTHQV KICDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTT AIDVWSVGCV LAELMLGQPL FPGESGVDQL VEIIKVLGTP TREEIKCMNP
301: NYTEFKFPQI KAHPWHKIFH KRMPPEAVDL VSRLLQYSPN LRCTALDALT HPFFDELRDP NTRLPNGRFL PPLFNFKSHE LKGVPVEILL KLIPEHARKQ
401: CPFLGL

Best Arabidopsis Sequence Match ( AT5G26751.1 )
(BLAST)

001: MASVGIAPNP GARDSTGVDK LPEEMNDMKI RDDKEMEATV VDGNGTETGH IIVTTIGGRN GQPKQTISYM AERVVGHGSF GVVFQAKCLE TGETVAIKKV
101: LQDRRYKNRE LQTMRLLDHP NVVSLKHCFF STTEKDELYL NLVLEYVPET VHRVIKHYNK LNQRMPLIYV KLYTYQIFRA LSYIHRCIGV CHRDIKPQNL
201: LVNPHTHQVK LCDFGSAKVL VKGEPNISYI CSRYYRAPEL IFGATEYTTA IDVWSAGCVL AELLLGQPLF PGESGVDQLV EIIKVLGTPT REEIKCMNPN
301: YTEFKFPQIK AHPWHKIFHK RMPPEAVDLV SRLLQYSPNL RSAALDTLVH PFFDELRDPN ARLPNGRFLP PLFNFKPHEL KGVPLEMVAK LVPEHARKQC
401: PWLGL

Arabidopsis Description

ASK1Shaggy-related protein kinase alpha [Source:UniProtKB/Swiss-Prot;Acc:P43288]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.