Factsheet for PGSC0003DMT400007088

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400051416

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05840.1	PGSC0003DMT400051416	AT1G68050.1	14749489

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g101000.2.1	Tomato	cytosol	99.51	99.51
KRG96686	Soybean	cytosol	93.89	94.58
KRH33767	Soybean	cytosol	94.38	94.15
VIT_14s0060g00600.t01	Wine grape	cytosol	87.53	93.96
KRH68409	Soybean	cytosol	93.15	93.84
AT5G26751.1	Thale cress	cytosol	92.42	93.33
Bra009916.1-P	Field mustard	cytosol	91.69	93.05
CDX88238	Canola	cytosol	91.69	93.05
CDX80585	Canola	cytosol	90.95	92.54
CDX87033	Canola	cytosol	91.2	91.87
CDY19757	Canola	cytosol	91.2	91.87
Bra036593.1-P	Field mustard	cytosol	90.95	91.63
AT3G05840.1	Thale cress	cytosol	90.95	90.95
Bra001169.1-P	Field mustard	cytosol	90.22	90.0
CDY49981	Canola	cytosol	90.22	89.78
CDX74129	Canola	cytosol	90.22	89.78
CDY05202	Canola	cytosol	89.98	89.76
Bra039407.1-P	Field mustard	cytosol	89.49	89.27
KRG90477	Soybean	cytosol	92.91	89.2
HORVU5Hr1G117030.1	Barley	cytosol	86.55	86.76
TraesCS4A01G361100.1	Wheat	cytosol	86.31	86.52
TraesCS5B01G511800.1	Wheat	cytosol	86.31	86.31
TraesCS5D01G512300.2	Wheat	cytosol	86.31	85.68
CDY18828	Canola	cytosol	83.37	84.41
Bra040251.1-P	Field mustard	cytosol	79.46	84.2
PGSC0003DMT400080607	Potato	cytosol	83.86	83.66
PGSC0003DMT400001392	Potato	cytosol	83.37	83.17
PGSC0003DMT400073091	Potato	cytosol	69.44	74.35
PGSC0003DMT400068764	Potato	cytosol	69.19	74.08
PGSC0003DMT400064027	Potato	cytosol	68.95	73.63
CDY27737	Canola	cytosol	89.49	71.21
PGSC0003DMT400052647	Potato	cytosol	71.39	67.28
PGSC0003DMT400071378	Potato	cytosol, mitochondrion	75.55	65.05
PGSC0003DMT400017984	Potato	cytosol, mitochondrion	73.59	64.73
PGSC0003DMT400064191	Potato	cytosol	25.43	31.23

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102577438	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	ProteinID:AAR25793
ProteinID:AAR25793.1	ProteinID:ABB55385	ProteinID:ABB55385.1	ProteinID:ABB87119	ProteinID:ABB87119.1	EMBL:AY450633
EMBL:DQ241848	EMBL:DQ252508	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	RefSeq:NP_001274855.1	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400002747	PGSC:PGSC0003DMG400002747
EnsemblPlants:PGSC0003DMT400007088	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF35
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q2VCJ3	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00005FEB9A	RefSeq:XP_006344811.1	RefSeq:XP_015162970.1	SEG:seg	:	:

Description

NtK-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400002747]

Coordinates

chr1:-:78578890..78585448

Molecular Weight (calculated)

46386.4 Da

IEP (calculated)

8.603

GRAVY (calculated)

-0.260

Length

409 amino acids

Sequence
(BLAST)

001: MASVGLAPTS GLRESSGHNA GVDRLPEEMN DMRIRDDKEM EATIVDGNGT ETGHIIVTTI GGRNGQPKQT ISYMAERVVG QGSFGVVFQA KCLETGETVA
101: IKKVLQDKRY KNRELQTMRL LDHPNVVSLK HCFFSTTDKD ELYLNLVLEY VPETVHRVIK HYNKLNQRMP LILVKLYTYQ IFRALSYIHR TIGVCHRDIK
201: PQNLLVNPHT HQVKLCDFGS AKVLVKGEPN ISYICSRYYR APELIFGATE YTTAIDVWSA GCVLAELLLG QPLFPGESGV DQLVEIIKVL GTPTREEIKC
301: MNPNYNEFKF PQIKAHPWHK IFHKRMPPEA VDLVSRLLQY SPNLRCGALD ALVHPFFDEL RDPNTRLPNG RFLPPLFNFK AHELKNVHAE ILLKLVPEHA
401: RKQCPSLGL

Best Arabidopsis Sequence Match ( AT5G26751.1 )
(BLAST)

001: MASVGIAPNP GARDSTGVDK LPEEMNDMKI RDDKEMEATV VDGNGTETGH IIVTTIGGRN GQPKQTISYM AERVVGHGSF GVVFQAKCLE TGETVAIKKV
101: LQDRRYKNRE LQTMRLLDHP NVVSLKHCFF STTEKDELYL NLVLEYVPET VHRVIKHYNK LNQRMPLIYV KLYTYQIFRA LSYIHRCIGV CHRDIKPQNL
201: LVNPHTHQVK LCDFGSAKVL VKGEPNISYI CSRYYRAPEL IFGATEYTTA IDVWSAGCVL AELLLGQPLF PGESGVDQLV EIIKVLGTPT REEIKCMNPN
301: YTEFKFPQIK AHPWHKIFHK RMPPEAVDLV SRLLQYSPNL RSAALDTLVH PFFDELRDPN ARLPNGRFLP PLFNFKPHEL KGVPLEMVAK LVPEHARKQC
401: PWLGL

Arabidopsis Description

ASK1Shaggy-related protein kinase alpha [Source:UniProtKB/Swiss-Prot;Acc:P43288]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.