Factsheet for PGSC0003DMT400071378

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g091620.2.1	Tomato	cytosol, mitochondrion	97.47	97.47
PGSC0003DMT400017984	Potato	cytosol, mitochondrion	82.11	83.87
VIT_15s0048g02010.t01	Wine grape	cytosol, mitochondrion	80.63	81.84
PGSC0003DMT400080607	Potato	cytosol	66.53	77.07
PGSC0003DMT400001392	Potato	cytosol	66.53	77.07
KRH48234	Soybean	cytosol, mitochondrion	75.79	76.6
KRH40543	Soybean	mitochondrion	73.26	75.65
PGSC0003DMT400007088	Potato	cytosol	65.05	75.55
KRH65140	Soybean	mitochondrion	74.74	75.53
AT4G00720.1	Thale cress	mitochondrion	74.53	75.0
PGSC0003DMT400073091	Potato	cytosol	59.79	74.35
CDX91895	Canola	mitochondrion	72.84	74.25
KRH00638	Soybean	mitochondrion	72.84	74.09
Bra000961.1-P	Field mustard	cytosol, mitochondrion	72.84	73.93
CDX74346	Canola	cytosol, mitochondrion	72.84	73.93
Bra037354.1-P	Field mustard	mitochondrion	73.47	73.32
PGSC0003DMT400068764	Potato	cytosol	58.74	73.04
CDY51144	Canola	mitochondrion	73.26	72.8
CDY07202	Canola	mitochondrion	72.0	72.61
EER92044	Sorghum	cytosol, mitochondrion	70.74	71.49
CDX67856	Canola	mitochondrion	64.63	71.06
Bra003440.1-P	Field mustard	mitochondrion	64.63	71.06
CDY45686	Canola	mitochondrion	64.63	71.06
Os10t0521700-01	Rice	cytosol, mitochondrion	70.11	71.0
AT3G61160.2	Thale cress	mitochondrion	65.26	70.78
Zm00001d029664_P001	Maize	cytosol, mitochondrion	70.32	70.61
Zm00001d048564_P003	Maize	cytosol, mitochondrion	69.68	70.43
CDY52332	Canola	mitochondrion	64.63	70.25
TraesCS1A01G189000.1	Wheat	cytosol, mitochondrion	69.26	70.15
TraesCS1D01G187400.1	Wheat	cytosol, mitochondrion	69.26	70.0
PGSC0003DMT400064027	Potato	cytosol	56.42	69.97
CDY65303	Canola	mitochondrion	64.21	69.79
Bra007577.1-P	Field mustard	mitochondrion	64.84	68.6
GSMUA_Achr8P00060_001	Banana	cytosol	68.0	68.58
GSMUA_Achr3P18230_001	Banana	cytosol, mitochondrion	66.53	67.23
TraesCS1B01G196700.3	Wheat	cytosol	67.16	67.16
GSMUA_Achr5P13650_001	Banana	cytosol	65.26	65.82
PGSC0003DMT400052647	Potato	cytosol	58.95	64.52
HORVU1Hr1G048580.8	Barley	cytosol, nucleus	70.53	58.77
PGSC0003DMT400064191	Potato	cytosol	21.89	31.23

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102587529	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CNN4	PFAM:PF00069
EnsemblPlantsGene:PGSC0003DMG400027771	PGSC:PGSC0003DMG400027771	EnsemblPlants:PGSC0003DMT400071378	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24057	PANTHER:PTHR24057:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002948A9C	RefSeq:XP_006339456.1	:	:	:

Description

Shaggy-like kinase 6 (Nsk6) [Source:PGSC_GENE;Acc:PGSC0003DMG400027771]

Coordinates

chr1:-:71035288..71039572

Molecular Weight (calculated)

53862.0 Da

IEP (calculated)

7.872

GRAVY (calculated)

-0.450

Length

475 amino acids

Sequence
(BLAST)

001: MNVMRRLKSI ASGRSSVSDP GGDSSIKRVK VEKEVDQRVV GETQMEERCT TTTVPKEDMA STSKETTARS TSAMDTRPEN SELDELPKEM HEMKIKDEKA
101: DKADSLEDNL KDMEPAVVSG NGTETGQIIV TTVSGRNGLE KQTLSYMAER VVGTGSFGVV FQAKCLETGE SVAIKKVLQD RRYKNRELQI MRTLDHPNVV
201: KLRHCFYSTT EKNEVYLNLV LEYVSETVYR VSRHYSKMNQ HMPNIYVQLY TYQICRALNY MHGVLGVCHR DIKPQNLLVN PHSHQLKLCD FGSAKMLVPG
301: EPNISYICSR YYRAPELIFG ATEYTSAIDM WSAGCVMAEL LLGQPLFPGE SGVDQLVEII KILGTPTREE IRCMNPNYTE FKFPQIKAHP WHKIFHKRMP
401: PEAVDLVSRL LQYSPTLRCT ALEACAHPFF DSLREPNACL PNGRPLPPLF NFTPQELSGV PAELRKRLIP EHLRK

Best Arabidopsis Sequence Match ( AT4G00720.1 )
(BLAST)

001: MNVMRRLKSI ASGRTSISSD PGGDYALKRA KLDQENDNLC VDPMQVDQNS SCFEMKADVL SQESVAGTSN VPAVSEKPVD DQLPDVMIEM KIRDERNANR
101: EDKDMETTVV NGSGTETGQV ITTTVGGRDG KPKQTISYMA QRVVGTGSFG VVFQAKCLET GEQVAIKKVL QDKRYKNREL QIMRLQDHPN VVRLRHSFFS
201: TTDKDELYLN LVLEYVPETV YRASKHYTKM NQHMPIIFVQ LYTYQICRAL NYLHRVVGVC HRDIKPQNLL VNPQTHQLKI CDFGSAKMLV PGEPNISYIC
301: SRYYRAPELI FGATEYTNAI DMWSGGCVMA ELLLGQPLFP GESGIDQLVE IIKILGTPTR EEIRCMNPNY TEFKFPQIKA HPWHKIFHKR MPPEAVDLVS
401: RLLQYSPNLR CTALEACAHP FFDDLRDPNV SLPNGRALPP LFNFTAQELA GASTELRQRL IPAHCQGTGS SS

Arabidopsis Description

ASK8Shaggy related protein kinase theta [Source:UniProtKB/TrEMBL;Acc:Q0WWY4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.