CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73319
CDY28412

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00720.1	CDX73319	AT1G35210.1	21798944
AT4G00720.1	CDY28412	AT1G35210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51144	Canola	mitochondrion	97.45	96.03
Bra037354.1-P	Field mustard	mitochondrion	96.82	95.8
CDX74346	Canola	cytosol, mitochondrion	91.08	91.67
AT4G00720.1	Thale cress	mitochondrion	91.72	91.53
CDX91895	Canola	mitochondrion	90.45	91.42
CDX88238	Canola	cytosol	64.76	75.68
CDX80585	Canola	cytosol	64.54	75.62
VIT_15s0048g02010.t01	Wine grape	cytosol, mitochondrion	74.95	75.43
CDX70574	Canola	cytosol	65.18	75.06
KRH48234	Soybean	cytosol, mitochondrion	74.73	74.89
CDX78587	Canola	cytosol	65.18	74.88
KRH65140	Soybean	mitochondrion	74.52	74.68
CDY19757	Canola	cytosol	64.33	74.63
CDX87033	Canola	cytosol	64.33	74.63
KRH40543	Soybean	mitochondrion	72.82	74.57
PGSC0003DMT400017984	Potato	cytosol, mitochondrion	73.04	73.98
CDY69647	Canola	cytosol	53.29	73.82
CDY49981	Canola	cytosol	64.12	73.48
CDX74129	Canola	cytosol	64.12	73.48
CDY66894	Canola	cytosol	58.17	73.26
CDY05202	Canola	cytosol	63.69	73.17
CDY70859	Canola	cytosol	57.96	72.99
Solyc05g051050.2.1	Tomato	cytosol, mitochondrion	71.97	72.75
CDX78886	Canola	cytosol	57.75	72.73
KRH00638	Soybean	mitochondrion	71.97	72.59
CDY64921	Canola	cytosol	57.54	72.46
CDY34051	Canola	cytosol	58.17	72.11
PGSC0003DMT400071378	Potato	cytosol, mitochondrion	72.61	72.0
CDY45686	Canola	mitochondrion	66.03	71.99
CDX67856	Canola	mitochondrion	66.03	71.99
Solyc01g091620.2.1	Tomato	cytosol, mitochondrion	72.4	71.79
CDX99437	Canola	cytosol	57.96	71.65
CDY10766	Canola	extracellular, plasma membrane, vacuole	33.76	70.98
CDY52332	Canola	mitochondrion	65.18	70.25
CDY65303	Canola	mitochondrion	64.54	69.57
EER92044	Sorghum	cytosol, mitochondrion	69.0	69.15
TraesCS1A01G189000.1	Wheat	cytosol, mitochondrion	68.79	69.08
CDY52692	Canola	cytosol, mitochondrion, nucleus	16.56	69.03
GSMUA_Achr8P00060_001	Banana	cytosol	69.0	69.0
CDY31060	Canola	plastid	61.57	68.88
CDY65729	Canola	plastid	61.57	68.88
CDY18828	Canola	cytosol	59.02	68.81
TraesCS1D01G187400.1	Wheat	cytosol, mitochondrion	68.58	68.72
Os10t0521700-01	Rice	cytosol, mitochondrion	68.37	68.66
CDX97773	Canola	cytosol	59.66	68.54
CDX94939	Canola	cytosol	60.51	68.35
CDX93471	Canola	cytosol	60.51	68.35
Zm00001d048564_P003	Maize	cytosol, mitochondrion	67.94	68.09
Zm00001d029664_P001	Maize	cytosol, mitochondrion	68.37	68.08
GSMUA_Achr3P18230_001	Banana	cytosol, mitochondrion	66.67	66.81
CDY62551	Canola	cytosol	37.16	66.29
TraesCS1B01G196700.3	Wheat	cytosol	66.67	66.11
GSMUA_Achr5P13650_001	Banana	cytosol	65.39	65.39
CDY72370	Canola	cytosol	14.65	65.09
CDY27737	Canola	cytosol	63.69	58.37
HORVU1Hr1G048580.8	Barley	cytosol, nucleus	69.43	57.37
CDX77348	Canola	plastid	19.53	52.57
CDX78658	Canola	cytosol, nucleus, peroxisome	59.24	49.12
CDY70654	Canola	cytosol	13.16	36.05
CDY57359	Canola	cytosol	22.29	31.63
CDY30613	Canola	cytosol	22.29	31.53
CDY57680	Canola	cytosol	22.29	31.53
CDX83104	Canola	cytosol	21.87	31.31
CDX98044	Canola	cytosol	10.19	30.0
CDX76880	Canola	cytosol, mitochondrion	21.87	29.68
CDY71648	Canola	plastid	9.13	26.71
CDY38928	Canola	plastid	21.66	25.44
CDX89544	Canola	plastid	22.29	25.18
CDY49445	Canola	plastid	22.51	25.18
CDY15289	Canola	vacuole	14.44	24.64
CDY67469	Canola	vacuole	15.07	24.23
CDY29766	Canola	golgi, plasma membrane	16.56	22.03
CDY25489	Canola	golgi, plasma membrane	14.01	13.58

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	GO:A0A078F244	EnsemblPlants:CDY07202
ProteinID:CDY07202	ProteinID:CDY07202.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00123561001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057
PANTHER:PTHR24057:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EDB984	SEG:seg	:	:	:	:

Description

BnaCnng02170D

Coordinates

chrLK031975:+:795760..799045

Molecular Weight (calculated)

52689.4 Da

IEP (calculated)

8.051

GRAVY (calculated)

-0.374

Length

471 amino acids

Sequence
(BLAST)

001: MNVMRRLKSI ASGRTSISSD PGGDYGLKRA KLDQDNDKLC TAGDDPMQVD QTSSSSSSSQ CVAGTSNVPP PAAAAATVDA QLPEVMTDMR IRDERNANRE
101: DKDMEPTVVN GSGTETGQVI TTTVGGRDGK PKQTISYMAQ RVVGTGSFGV VFQAKCLETG EQVAIKKVLQ DKRYKNRELQ IMRLQDHPNV VRLRHSFFST
201: TEKDELYLNL VLEFVPETVY RALKHYTKMN QHMPIILVQL YTYQICRALN YLHRVVGVCH RDIKPQNLLV NSQTNQLKIC DFGSAKMLVP GEPNISYICS
301: RYYRAPELIF GATEYTNAID MWSGGCVMAE LLLGQPLFPG ESGIDQLVEI IKILGTPTRE EIRCMNPNYT EFKFPQIKAH PWHKIFQKRM PPEAVDLVSR
401: LLQYSPNLRC TALEACAHPF FDDLRDPNVL LPNGRAMPPL FNFTPQELAG ASTELRQRLI PAHWQGTGSS S

Best Arabidopsis Sequence Match ( AT4G00720.1 )
(BLAST)

001: MNVMRRLKSI ASGRTSISSD PGGDYALKRA KLDQENDNLC VDPMQVDQNS SCFEMKADVL SQESVAGTSN VPAVSEKPVD DQLPDVMIEM KIRDERNANR
101: EDKDMETTVV NGSGTETGQV ITTTVGGRDG KPKQTISYMA QRVVGTGSFG VVFQAKCLET GEQVAIKKVL QDKRYKNREL QIMRLQDHPN VVRLRHSFFS
201: TTDKDELYLN LVLEYVPETV YRASKHYTKM NQHMPIIFVQ LYTYQICRAL NYLHRVVGVC HRDIKPQNLL VNPQTHQLKI CDFGSAKMLV PGEPNISYIC
301: SRYYRAPELI FGATEYTNAI DMWSGGCVMA ELLLGQPLFP GESGIDQLVE IIKILGTPTR EEIRCMNPNY TEFKFPQIKA HPWHKIFHKR MPPEAVDLVS
401: RLLQYSPNLR CTALEACAHP FFDDLRDPNV SLPNGRALPP LFNFTAQELA GASTELRQRL IPAHCQGTGS SS

Arabidopsis Description

ASK8Shaggy related protein kinase theta [Source:UniProtKB/TrEMBL;Acc:Q0WWY4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.