CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH08190
KRH18664
KRH28715
KRH31638
KRH69070
KRH69884
KRH76747

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06390.1	KRH08190	AT3G50910.1	21798944
AT1G06390.1	KRH28715	AT3G50910.1	21798944
AT1G06390.1	KRH69884	AT3G50910.1	21798944
AT1G06390.1	KRH76747	AT3G50910.1	21798944
AT2G30980.1	KRG89812	AT2G41090.1	17360592
AT2G30980.1	KRG94975	AT2G41090.1	17360592
AT2G30980.1	KRH18664	AT2G41090.1	17360592
AT2G30980.1	KRG89812	AT2G41100.1	17360592
AT2G30980.1	KRG94975	AT2G41100.1	17360592
AT2G30980.1	KRH18664	AT2G41100.1	17360592
AT2G30980.1	KRH31638	AT4G14640.1	17360592
AT2G30980.1	KRH69070	AT4G14640.1	17360592
AT2G30980.1	KRG89812	AT5G21274.1	17360592
AT2G30980.1	KRG94975	AT5G21274.1	17360592
AT2G30980.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22265	Soybean	cytosol	95.11	93.29
CDY66894	Canola	cytosol	77.26	84.49
KRH61707	Soybean	cytosol	76.77	82.63
KRH52380	Soybean	cytosol	76.53	82.37
KRH21245	Soybean	cytosol	75.06	82.09
AT1G06390.1	Thale cress	cytosol	80.93	81.33
KRH11042	Soybean	cytosol	75.55	81.32
Os01t0205700-01	Rice	cytosol	46.21	81.12
AT2G30980.1	Thale cress	cytosol	80.68	80.1
CDX97773	Canola	cytosol	80.2	80.0
Bra021685.1-P	Field mustard	cytosol	80.2	80.0
TraesCS3A01G136500.1	Wheat	cytosol	73.84	79.89
KRH25797	Soybean	cytosol	80.93	78.81
Os05t0207500-01	Rice	cytosol	77.26	78.61
KRH55721	Soybean	cytosol	80.44	78.52
Bra018285.1-P	Field mustard	cytosol	67.48	78.19
TraesCS1D01G129000.2	Wheat	cytosol	76.53	77.86
TraesCS1B01G142300.1	Wheat	cytosol	76.28	77.61
TraesCS1A01G125000.1	Wheat	cytosol	76.28	77.61
EES00093	Sorghum	cytosol	75.55	76.49
CDY10766	Canola	extracellular, plasma membrane, vacuole	41.81	76.34
PGSC0003DMT400052647	Potato	cytosol	80.68	76.04
Solyc07g055200.2.1	Tomato	cytosol	80.93	75.74
Zm00001d008893_P001	Maize	cytosol	75.06	75.62
KRH42881	Soybean	cytosol	68.95	73.63
HORVU3Hr1G026020.3	Barley	mitochondrion	74.33	73.43
KRH58985	Soybean	cytosol	68.46	73.11
TraesCS3D01G137200.1	Wheat	cytosol	71.64	73.07
Zm00001d039407_P001	Maize	cytosol	74.82	71.33
KRG96686	Soybean	cytosol	70.66	71.18
KRH68409	Soybean	cytosol	70.66	71.18
KRH33767	Soybean	cytosol	70.66	70.49
KRH31752	Soybean	cytosol	70.17	70.17
KRG90477	Soybean	cytosol	70.66	67.84
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	36.43	66.22
HORVU6Hr1G046490.1	Barley	cytosol	20.29	65.87
KRH69166	Soybean	cytosol	71.15	64.52
KRH26299	Soybean	cytosol	65.04	63.33
KRH06055	Soybean	cytosol	64.55	62.86
HORVU2Hr1G051860.1	Barley	cytosol	25.67	62.5
KRH21176	Soybean	cytosol	38.88	61.15
KRH40543	Soybean	mitochondrion	67.73	60.22
KRH65140	Soybean	mitochondrion	68.95	60.0
KRH48234	Soybean	cytosol, mitochondrion	68.95	60.0
KRH62838	Soybean	cytosol, mitochondrion	11.74	58.54
KRH00638	Soybean	mitochondrion	66.5	58.24
Solyc04g025600.1.1	Tomato	cytosol	14.67	56.07
KRH70115	Soybean	cytosol	47.43	55.91
KRH75231	Soybean	cytosol	12.22	50.0
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	12.71	45.22
TraesCS1B01G361800.1	Wheat	endoplasmic reticulum, extracellular, plastid	12.47	44.35
TraesCS5B01G230700.1	Wheat	endoplasmic reticulum, extracellular, plastid	12.22	42.73
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.98	41.88
KRH12527	Soybean	cytosol, endoplasmic reticulum, plasma membrane	21.03	37.89
KRH58078	Soybean	cytosol	1.71	36.84
KRH32741	Soybean	mitochondrion	17.36	31.28
KRH77093	Soybean	nucleus	25.18	30.93
KRH28388	Soybean	cytosol	25.18	30.93
KRH04448	Soybean	nucleus	24.94	29.39
KRH04471	Soybean	nucleus	25.67	26.38
KRH58076	Soybean	endoplasmic reticulum	25.18	26.28
KRH58068	Soybean	mitochondrion	25.92	25.79

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100806839	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	EMBL:ACUP02007764
EnsemblPlantsGene:GLYMA_12G212000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1LUP0	InterPro:IPR000719
EnsemblPlants:KRH27067	ProteinID:KRH27067	ProteinID:KRH27067.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF12	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000152A94E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr12:+:37097018..37101883

Molecular Weight (calculated)

46316.2 Da

IEP (calculated)

8.134

GRAVY (calculated)

-0.313

Length

409 amino acids

Sequence
(BLAST)

001: MASMPLGPQQ QLPPPPPQQP PPAENDAMKV DSRGGSDAGT EKEMSAPVAD GNDALTGHII STTIAGKNGE PKQTISYMAE RVVGTGSFGI VFQAKCLETG
101: EAVAIKKVLQ DRRYKNRELQ LMRVMDHPNI ISLSNYFFST TSRDELFLNL VMEYVPETIF RVIKHYSSMK QRMPLIYVKL YTYQIFRGLA YIHTVPGICH
201: RDLKPQNLLV DRLTHQVKLC DFGSAKVLVE GESNISYICS RYYRAPELIF GAAEYTTSVD IWSAGCVLAE LLLGQPLFPG ENQVDQLVEI IKILGTPTRE
301: EIRCMNPNYT DFRFPHIKAH PWHKVFHKRM PPEAIDLASR LLQYSPKLRY SAVEAMAHPF FDELREPNAR LPNGRPLPPL FNFKQELDGA PPELLPKLIP
401: EHVRRQTQM

Best Arabidopsis Sequence Match ( AT1G06390.1 )
(BLAST)

001: MASLPLGPQP HALAPPLQLH DGDALKRRPE LDSDKEMSAA VIEGNDAVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGESVAIKK
101: VLQDRRYKNR ELQLMRPMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLRHYT SSNQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFNELREP NARLPNGRPL PPLFNFKQEL GGASMELINR LIPEHVRRQM
401: STGLQNS

Arabidopsis Description

ASK9SK22 [Source:UniProtKB/TrEMBL;Acc:A0A178WCN5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.