Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69070 | Soybean | cytosol | 96.0 | 96.0 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 90.0 | 90.6 |
| KRG92449 | Soybean | cytosol | 90.0 | 90.0 |
| KRH34350 | Soybean | cytosol | 89.33 | 89.33 |
| Solyc06g053930.2.1 | Tomato | cytosol | 86.67 | 87.25 |
| PGSC0003DMT400042062 | Potato | cytosol | 85.33 | 85.33 |
| AT4G14640.1 | Thale cress | cytosol | 82.67 | 82.12 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 80.0 | 81.08 |
| Bra023786.1-P | Field mustard | cytosol | 84.0 | 80.77 |
| CDY34215 | Canola | cytosol | 84.0 | 80.77 |
| Bra001892.1-P | Field mustard | cytosol | 82.67 | 80.52 |
| CDX92965 | Canola | cytosol | 82.67 | 80.52 |
| Bra033898.1-P | Field mustard | cytosol | 82.67 | 80.0 |
| CDY10686 | Canola | cytosol | 82.0 | 79.35 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 77.33 | 78.38 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 77.33 | 78.38 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 77.33 | 78.38 |
| CDY06478 | Canola | cytosol | 78.67 | 78.15 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 76.67 | 77.7 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 76.67 | 77.18 |
| KRG94975 | Soybean | nucleus | 76.67 | 77.18 |
| Bra039723.1-P | Field mustard | cytosol | 78.67 | 77.12 |
| KRH68729 | Soybean | cytosol | 75.33 | 75.84 |
| KRG96966 | Soybean | cytosol | 75.33 | 75.84 |
| CDX94883 | Canola | cytosol | 56.0 | 75.68 |
| CDY10325 | Canola | cytosol | 56.0 | 74.34 |
| PGSC0003DMT400034833 | Potato | cytosol | 74.67 | 73.2 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 72.0 | 72.97 |
| AT3G22930.1 | Thale cress | cytosol | 83.33 | 72.25 |
| Solyc03g005240.1.1 | Tomato | cytosol | 72.67 | 71.24 |
| KRH18664 | Soybean | cytosol | 65.33 | 70.0 |
| CDY40824 | Canola | cytosol | 84.0 | 70.0 |
| KRH67274 | Soybean | cytosol | 68.0 | 68.92 |
| KRG95596 | Soybean | cytosol | 66.67 | 67.57 |
| KRH34082 | Soybean | cytosol | 66.0 | 66.44 |
| Os03t0743500-02 | Rice | nucleus | 66.67 | 64.94 |
| KRG92667 | Soybean | cytosol | 64.0 | 64.43 |
| KXG37587 | Sorghum | cytosol | 66.0 | 64.29 |
| KRG94637 | Soybean | cytosol | 48.67 | 64.04 |
| KRG89812 | Soybean | cytosol, mitochondrion | 64.67 | 58.79 |
| KRH71363 | Soybean | cytosol | 56.67 | 57.05 |
| KRH32074 | Soybean | cytosol | 54.0 | 54.36 |
| Zm00001d033980_P001 | Maize | cytosol | 54.0 | 51.59 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 61.33 | 50.27 |
| TraesCS5A01G382800.2 | Wheat | plastid | 60.0 | 48.13 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 69.33 | 46.02 |
| KRH28027 | Soybean | cytosol, endoplasmic reticulum, nucleus | 43.33 | 44.22 |
| KRH77406 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 43.33 | 44.22 |
| KRH25249 | Soybean | cytosol | 45.33 | 41.72 |
| KRH30413 | Soybean | cytosol | 44.0 | 41.51 |
| KRH04023 | Soybean | cytosol | 39.33 | 40.14 |
| KRH10567 | Soybean | endoplasmic reticulum | 42.0 | 37.06 |
| KRH56721 | Soybean | cytosol | 38.67 | 36.02 |
| KRH62961 | Soybean | cytosol | 38.0 | 35.62 |
| KRH07628 | Soybean | cytosol | 38.0 | 35.62 |
| KRH43884 | Soybean | cytosol | 29.33 | 33.59 |
| KRH54782 | Soybean | cytosol | 35.33 | 33.12 |
| KRG98826 | Soybean | cytosol | 33.33 | 31.85 |
| KRG98823 | Soybean | cytosol | 32.0 | 30.57 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 1.33 | 1.46 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100526987 | MapMan:35.1 | EMBL:ACUP02006073 | EMBL:BT091795 | UniProt:C6T2Y6 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | EnsemblPlantsGene:GLYMA_10G002200 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:IPR002048 | EnsemblPlants:KRH31638 | ProteinID:KRH31638 | ProteinID:KRH31638.1 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF336 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0001B15273 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:243597..246211
Molecular Weight (calculated)
16898.9 Da
IEP (calculated)
3.762
GRAVY (calculated)
-0.423
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVLSEEQI GEIKEAFGLF DKDGDGCITV EELATVIRSL DQNPTEEELQ DMINEVDTDG NGTIEFVEFL NLMAKKMKET DAEEDLKEAF KVFDKDQNGY
101: ISASELRHVM INLGEKLTDE EVEQMIKEAD LDGDGQVGYD EFVKMMMIIG
101: ISASELRHVM INLGEKLTDE EVEQMIKEAD LDGDGQVGYD EFVKMMMIIG
001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
Arabidopsis Description
CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.