CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74740.1	KRG89812	AT2G41090.1	17360592
AT1G74740.1	KRG94975	AT2G41090.1	17360592
AT1G74740.1	KRH18664	AT2G41090.1	17360592
AT1G74740.1	KRG89812	AT2G41100.1	17360592
AT1G74740.1	KRG94975	AT2G41100.1	17360592
AT1G74740.1	KRH18664	AT2G41100.1	17360592
AT1G74740.1	KRH31638	AT4G14640.1	17360592
AT1G74740.1	KRH69070	AT4G14640.1	17360592
AT1G74740.1	KRG89812	AT5G21274.1	17360592
AT1G74740.1	KRG94975	AT5G21274.1	17360592
AT1G74740.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63420	Soybean	cytosol	97.28	96.4
VIT_17s0000g05520.t01	Wine grape	cytosol	69.15	88.4
KRH03406	Soybean	cytosol	84.94	86.51
KRH56973	Soybean	cytosol	84.03	85.9
GSMUA_Achr2P17730_001	Banana	cytosol	61.16	83.62
AT1G18890.1	Thale cress	cytosol, plastid	82.21	83.12
PGSC0003DMT400034291	Potato	cytosol	80.4	82.34
Solyc03g113390.2.1	Tomato	cytosol	80.22	82.16
AT1G74740.1	Thale cress	cytosol	80.4	81.89
CDX81903	Canola	cytosol, plastid	80.58	81.77
CDY45391	Canola	cytosol	80.76	81.5
Bra015896.1-P	Field mustard	cytosol	80.58	81.32
CDY21691	Canola	cytosol, plastid	80.58	81.17
CDX73108	Canola	cytosol	80.58	81.17
Bra031055.1-P	Field mustard	cytosol, plastid	78.04	80.98
KRH00256	Soybean	cytosol	65.52	75.21
Bra025696.1-P	Field mustard	cytosol, plastid	70.96	74.05
CDY26714	Canola	cytosol	81.13	73.4
CDY19259	Canola	cytosol, plastid	81.31	73.08
KRH49392	Soybean	cytosol	69.51	71.86
KRG95275	Soybean	cytosol	65.7	67.66
KRH33161	Soybean	cytosol	64.79	67.61
KRH71977	Soybean	cytosol	64.07	67.24
KRH66958	Soybean	cytosol, mitochondrion	64.97	67.04
Os03t0688300-01	Rice	plasma membrane	69.33	66.55
TraesCS4D01G027600.1	Wheat	plastid	68.6	66.32
EER93646	Sorghum	plastid	70.24	66.04
Zm00001d013527_P002	Maize	cytosol, plastid	70.05	65.98
TraesCS4A01G283400.1	Wheat	plastid	68.06	65.91
TraesCS4B01G030100.1	Wheat	plastid	68.24	62.67
HORVU4Hr1G004540.20	Barley	plastid	67.33	61.63
KRH24650	Soybean	mitochondrion, plastid	54.99	56.85
KRH29653	Soybean	plastid	54.27	55.17
KRG95088	Soybean	cytosol	30.49	40.38
KRH08079	Soybean	plastid	37.93	39.58
KRH69782	Soybean	plastid	37.21	38.68
KRH06401	Soybean	cytosol	28.31	37.59
KRH33063	Soybean	endoplasmic reticulum, vacuole	23.05	37.24
KRH76656	Soybean	plastid	37.21	36.48
KRH28800	Soybean	plastid	36.84	36.12
KRH28502	Soybean	cytosol, mitochondrion	36.3	35.21
KRH57894	Soybean	cytosol, plastid	36.66	34.95
KRH71707	Soybean	cytosol	35.93	33.96
KRH76957	Soybean	plastid	36.84	33.61
KRH71170	Soybean	cytosol	35.93	33.11
KRH50248	Soybean	cytosol	35.75	32.94
KRH53593	Soybean	cytosol	34.12	31.39
KRH64343	Soybean	cytosol	33.94	31.32
KRH47835	Soybean	cytosol	33.03	30.74
KRH26154	Soybean	cytosol	21.96	30.63
KRH33065	Soybean	cytosol	15.24	28.67

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100800664	MapMan:18.4.5.4	MapMan:25.1.2.1	Gene3D:3.30.200.20
EMBL:ACUP02003532	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_06G189600
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488
GO:GO:0005509	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738
GO:GO:0009931	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	UniProt:I1KCN9	InterPro:IPR000719	InterPro:IPR002048
EnsemblPlants:KRH54494	ProteinID:KRH54494	ProteinID:KRH54494.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499
ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349
PANTHER:PTHR24349:SF167	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002338A7F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:16618727..16623661

Molecular Weight (calculated)

62489.0 Da

IEP (calculated)

6.400

GRAVY (calculated)

-0.446

Length

551 amino acids

Sequence
(BLAST)

001: MGNCNVCAKA DVVEDSNNNR NKKSNETNRA RKKEPKPFTD EPARSTAAPI RVLKDVIPMS HRTRISDKYI LGRELGRGEF GITYLCTDRE TKEALACKSI
101: SKRKLRTAVD IDDVRREVAI MSTLPEHPNV VKLKATYEDN ENVHLVMELC EGGELFDRIV ARGHYSERAA AAVARTIAEV VRMCHSNGVM HRDLKPENFL
201: FANKKENSAL KAIDFGLSVF FKPGERFSEI VGSPYYMAPE VLKRNYGPEV DVWSAGVILY ILLCGVPPFW AETEQGVALA ILRGVIDFKR EPWPQISESA
301: KSLVRRMLEP DPKNRLTAEQ VLEHPWLQNA KKAPNVPLGD IVRSRLKQFS VMNRFKKKAL RVIADHLSVE EVEIIKDMFT LMDTDKDGRV TFEELKAGLR
401: KVGSQLAEPE IKMLMEVADV DGNGVLDYGE FVAVTIHLQK MENDEHFHKA FKFFDKDGNG YIELRELEEA LADESGETDA DVLNDIMREV DTDKDGRISY
501: EEFVAMMKTG TDWRKASRQY SRERFKSLSL NLMKDGSLQL HDEITGQAVV V

Best Arabidopsis Sequence Match ( AT1G18890.1 )
(BLAST)

001: MGNCNACVRP DSKESKPSSK PKKPNRDRKL NPFAGDFTRS PAPIRVLKDV IPMSNQTQIS DKYILGRELG RGEFGITYLC TDRETHEALA CKSISKRKLR
101: TAVDIEDVRR EVAIMSTLPE HPNVVKLKAS YEDNENVHLV MELCEGGELF DRIVARGHYT ERAAAAVART IAEVVMMCHS NGVMHRDLKP ENFLFANKKE
201: NSPLKAIDFG LSVFFKPGDK FTEIVGSPYY MAPEVLKRDY GPGVDVWSAG VIIYILLCGV PPFWAETEQG VALAILRGVL DFKRDPWPQI SESAKSLVKQ
301: MLDPDPTKRL TAQQVLAHPW IQNAKKAPNV PLGDIVRSRL KQFSMMNRFK KKVLRVIAEH LSIQEVEVIK NMFSLMDDDK DGKITYPELK AGLQKVGSQL
401: GEPEIKMLME VADVDGNGFL DYGEFVAVII HLQKIENDEL FKLAFMFFDK DGSTYIELDE LREALADELG EPDASVLSDI MREVDTDKDG RINYDEFVTM
501: MKAGTDWRKA SRQYSRERFK SLSINLMKDG SLHLHDALTG QTVPV

Arabidopsis Description

CPK10Calcium-dependent protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.