CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH07474
KRH39566
KRH74387

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	KRH07474	AT4G17750.1	18466301
AT2G41140.1	KRH39566	AT4G17750.1	18466301
AT2G41140.1	KRH74387	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33063	Soybean	endoplasmic reticulum, vacuole	55.06	94.13
KRG95088	Soybean	cytosol	65.52	91.83
GSMUA_Achr6P16020_001	Banana	cytosol	60.72	82.52
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	83.19	81.79
AT3G56760.1	Thale cress	cytosol	80.79	81.63
CDY35427	Canola	cytosol	79.25	81.48
Bra000215.1-P	Field mustard	cytosol	79.25	81.48
KRH33065	Soybean	cytosol	40.82	81.23
Solyc10g078390.1.1	Tomato	cytosol	79.93	81.18
CDY22505	Canola	cytosol	79.07	81.16
AT2G41140.1	Thale cress	cytosol	80.1	81.08
PGSC0003DMT400021598	Potato	mitochondrion	79.59	80.84
CDY23873	Canola	cytosol	80.1	80.8
CDX79956	Canola	cytosol	79.93	80.76
Bra004600.1-P	Field mustard	cytosol	79.76	80.59
HORVU7Hr1G066710.3	Barley	cytosol	23.5	80.12
HORVU6Hr1G016380.1	Barley	cytosol	23.33	79.53
GSMUA_Achr10P...	Banana	cytosol	78.22	79.17
Os07t0641200-01	Rice	plasma membrane	34.99	77.86
CDY47375	Canola	cytosol, nucleus, plasma membrane	76.5	77.7
Bra014673.1-P	Field mustard	cytosol, nucleus, plasma membrane	76.33	77.39
CDX76010	Canola	cytosol	75.64	77.37
HORVU3Hr1G026700.1	Barley	plasma membrane	18.52	77.14
Os03t0366200-01	Rice	cytosol, plasma membrane	37.91	76.47
GSMUA_Achr6P23680_001	Banana	cytosol	75.13	76.44
TraesCS2A01G146200.2	Wheat	cytosol	76.67	75.63
TraesCS2D01G150800.1	Wheat	cytosol	76.5	75.21
TraesCS2B01G171600.1	Wheat	cytosol	76.5	75.21
EER99788	Sorghum	cytosol	76.5	75.21
GSMUA_Achr3P18430_001	Banana	cytosol	69.3	74.95
HORVU5Hr1G097280.1	Barley	extracellular, plasma membrane	12.01	74.47
Bra016950.1-P	Field mustard	cytosol	61.23	72.56
CDY57585	Canola	cytosol, mitochondrion	51.29	72.22
EER94810	Sorghum	cytosol	72.9	71.79
HORVU1Hr1G005350.3	Barley	endoplasmic reticulum, plasma membrane	23.67	71.5
Zm00001d047428_P001	Maize	cytosol	72.38	70.57
KRH57894	Soybean	cytosol, plastid	68.61	69.2
KRH50248	Soybean	cytosol	69.81	68.06
CDY06943	Canola	cytosol	54.37	68.03
KRH71170	Soybean	cytosol	69.47	67.73
KRH28502	Soybean	cytosol, mitochondrion	65.69	67.43
KRH76957	Soybean	plastid	68.95	66.56
KRH06401	Soybean	cytosol	47.34	66.51
Zm00001d022305_P001	Maize	cytosol	65.01	63.59
Zm00001d007029_P001	Maize	cytosol	64.84	63.21
Zm00001d029264_P004	Maize	cytosol	72.21	62.84
KRH47835	Soybean	cytosol	60.38	59.46
KRH64343	Soybean	cytosol	59.52	58.12
KRH53593	Soybean	cytosol	59.35	57.76
HORVU2Hr1G025890.1	Barley	cytosol	71.01	51.75
KRH26154	Soybean	cytosol	33.45	49.37
KRH08079	Soybean	plastid	40.14	44.32
KRH69782	Soybean	plastid	40.14	44.15
KRH76656	Soybean	plastid	41.17	42.7
KRH28800	Soybean	plastid	41.17	42.7
KRG95275	Soybean	cytosol	34.48	37.57
KRH66958	Soybean	cytosol, mitochondrion	34.31	37.45
KRH56973	Soybean	cytosol	33.79	36.55
KRH33161	Soybean	cytosol	32.76	36.17
KRH54494	Soybean	cytosol	33.96	35.93
KRH03406	Soybean	cytosol	33.28	35.86
KRH63420	Soybean	cytosol	34.13	35.79
KRH49392	Soybean	cytosol	32.59	35.65
KRH71977	Soybean	cytosol	32.08	35.62
KRH00256	Soybean	cytosol	29.16	35.42
KRH24650	Soybean	mitochondrion, plastid	30.87	33.77
KRH29653	Soybean	plastid	30.87	33.21

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100783262	MapMan:18.4.5.5	Gene3D:3.30.200.20	EMBL:ACUP02001035
InterPro:EF-hand-dom_pair	EnsemblPlantsGene:GLYMA_02G163300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004683	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	UniProt:I1JFP7	InterPro:IPR000719
EnsemblPlants:KRH71707	ProteinID:KRH71707	ProteinID:KRH71707.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002336F32	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:21891027..21898084

Molecular Weight (calculated)

65237.2 Da

IEP (calculated)

9.139

GRAVY (calculated)

-0.299

Length

583 amino acids

Sequence
(BLAST)

001: MGICHGKPIE TQQSQRETNN PSEFPSDHPT PTKPPKASSK FPFYSPSPLP NWFKNSPSSN SNPSSVSSTP LRIFKRPFPP PSPAKHIRAL LARRHGSVKP
101: NEAAIPEGSE CEVGLDKSFG FAKQFSAHYE LSDEVGRGHF GYTCSAKGKK GAFKGVDVAV KVIPKAKMTT AIAIEDVRRE VKILRALTGH KNLVQFYEAY
201: EDDANVYIVM ELCKGGELLD RILSRGGKYS EEDARVVMIQ ILSVVAFCHL QGVVHRDLKP ENFLFTSKDD NSSLKAIDFG LSDYVKPDER LNDIVGSAYY
301: VAPEVLHRSY GTEADMWSIG VIAYILLCGS RPFWARTESG IFRAVLKADP SFDEAPWPSL SVDAKDFVKR LLNKDYRKRL TAAQALSHPW LVNHHDDMRI
401: PLDMIIHKLV KAYICSSSLR KSALRALAKT LTVAQLTYLR DQYTLLGPNK SGLISMQNFK TAVLRSSTDA SKDSRVLEYV SMVSSIQYRK LDFEEFCAAA
501: ISVHQLEGME TWEQHARRAY ELFEKEGNRP IMIEELASEL GLSPSVPVHV VLQDWIRHSD GKLSFLGFVR LLHGVSARAF QKA

Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)

001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA

Arabidopsis Description

CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.