Factsheet for GSMUA_Achr6P16020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P27600_001
GSMUA_Achr4P04500_001
GSMUA_Achr4P17040_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	GSMUA_Achr3P27600_001	AT4G17750.1	18466301
AT2G41140.1	GSMUA_Achr4P04500_001	AT4G17750.1	18466301
AT2G41140.1	GSMUA_Achr4P17040_001	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0641200-01	Rice	plasma membrane	49.65	81.3
HORVU7Hr1G066710.3	Barley	cytosol	32.4	81.29
KRG95088	Soybean	cytosol	78.79	81.25
HORVU6Hr1G016380.1	Barley	cytosol	32.17	80.7
Os03t0366200-01	Rice	cytosol, plasma membrane	54.08	80.28
KRH33063	Soybean	endoplasmic reticulum, vacuole	63.4	79.77
HORVU5Hr1G097280.1	Barley	extracellular, plasma membrane	16.78	76.6
HORVU3Hr1G026700.1	Barley	plasma membrane	24.48	75.0
GSMUA_Achr3P18430_001	Banana	cytosol	92.54	73.65
HORVU1Hr1G005350.3	Barley	endoplasmic reticulum, plasma membrane	31.7	70.47
GSMUA_Achr10P...	Banana	cytosol	93.24	69.44
GSMUA_Achr6P23680_001	Banana	cytosol	90.21	67.54
Solyc10g078390.1.1	Tomato	cytosol	81.82	61.15
EER99788	Sorghum	cytosol	84.15	60.88
PGSC0003DMT400021598	Potato	mitochondrion	81.35	60.8
TraesCS2A01G146200.2	Wheat	cytosol	83.68	60.74
KRH71707	Soybean	cytosol	82.52	60.72
TraesCS2D01G150800.1	Wheat	cytosol	83.68	60.54
TraesCS2B01G171600.1	Wheat	cytosol	83.68	60.54
CDY35427	Canola	cytosol	79.95	60.49
Bra000215.1-P	Field mustard	cytosol	79.95	60.49
CDY22505	Canola	cytosol	79.95	60.39
Bra016950.1-P	Field mustard	cytosol	69.23	60.37
Bra004600.1-P	Field mustard	cytosol	80.65	59.97
CDX79956	Canola	cytosol	80.42	59.79
AT2G41140.1	Thale cress	cytosol	80.19	59.72
CDY23873	Canola	cytosol	80.42	59.69
CDY57585	Canola	cytosol, mitochondrion	57.58	59.66
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	82.28	59.53
CDY47375	Canola	cytosol, nucleus, plasma membrane	79.49	59.41
AT3G56760.1	Thale cress	cytosol	79.25	58.93
Bra014673.1-P	Field mustard	cytosol, nucleus, plasma membrane	78.79	58.78
CDX76010	Canola	cytosol	78.09	58.77
EER94810	Sorghum	cytosol	80.65	58.45
Zm00001d047428_P001	Maize	cytosol	79.95	57.36
CDY06943	Canola	cytosol	61.54	56.65
GSMUA_Achr1P21380_001	Banana	cytosol	75.99	53.71
GSMUA_Achr2P00480_001	Banana	cytosol	36.6	53.22
GSMUA_Achr2P07660_001	Banana	cytosol	74.83	52.88
GSMUA_Achr9P20900_001	Banana	cytosol	66.43	52.49
GSMUA_Achr3P12500_001	Banana	cytosol	65.5	52.04
GSMUA_Achr7P05810_001	Banana	cytosol	65.97	51.74
GSMUA_AchrUn_...	Banana	cytosol	64.1	51.31
Zm00001d029264_P004	Maize	cytosol	79.72	51.04
GSMUA_Achr2P03380_001	Banana	cytosol	63.87	50.93
GSMUA_Achr1P04170_001	Banana	cytosol	63.87	50.37
Zm00001d022305_P001	Maize	cytosol	69.0	49.66
Zm00001d007029_P001	Maize	cytosol	68.07	48.83
HORVU2Hr1G025890.1	Barley	cytosol	83.92	45.0
GSMUA_Achr8P19290_001	Banana	cytosol	50.58	41.02
GSMUA_Achr1P08900_001	Banana	plastid	51.05	40.86
GSMUA_Achr2P17730_001	Banana	cytosol	36.13	38.46
GSMUA_Achr5P18720_001	Banana	plastid	49.18	37.21
GSMUA_Achr3P29750_001	Banana	cytosol	40.33	34.33
GSMUA_AchrUn_...	Banana	cytosol	41.03	34.04
GSMUA_Achr8P02740_001	Banana	cytosol	40.09	33.2
GSMUA_Achr4P13880_001	Banana	cytosol	40.79	33.14
GSMUA_Achr5P29340_001	Banana	cytosol	40.79	33.14
GSMUA_Achr4P06930_001	Banana	cytosol	37.53	33.13
GSMUA_Achr8P31440_001	Banana	cytosol	38.46	32.42
GSMUA_Achr2P07790_001	Banana	cytosol	38.23	32.16
GSMUA_AchrUn_...	Banana	cytosol	37.06	31.86
GSMUA_Achr4P18940_001	Banana	cytosol	38.23	30.77
GSMUA_Achr3P21540_001	Banana	cytosol	36.13	30.1
GSMUA_Achr3P19300_001	Banana	cytosol	36.36	29.38

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G16020_001	EnsemblPlants:GSMUA_Achr6P16020_001	EnsemblPlants:GSMUA_Achr6T16020_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0T7F0	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349
PANTHER:PTHR24349:SF92	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295C309	SEG:seg	:	:	:	:

Description

Calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G16020_001]

Coordinates

chr6:-:10696935..10701285

Molecular Weight (calculated)

48275.4 Da

IEP (calculated)

7.546

GRAVY (calculated)

-0.106

Length

429 amino acids

Sequence
(BLAST)

001: MKGEEVAVKV IPKAKMTTAI AIEDVRREVR ILSCLTGHKN LVQFYDSFED EDNVYIVMEL CKGGELLERI LSRGGKYSEE DAKAVIVQIL SAVSFCHLQG
101: VVHRDLKPEN FLFTSEGEKS TLKAIDFGLS DFVKPDERLN DIVGSAYYVA PEVLHRSYGT EADMWSIGVI AYILLCGSRP FWARTESGIF RAVLKAEPTF
201: DEAPWPSLSS QAKDFVKKLL NKDYRKRMTA AQALCHPWLR NPEVKIPLDI IVYKLVKAYI CSSSLRKSAL RALAKTLTVD QLYCLREQFA LLGPNKSGYI
301: SLQNLKTALS RNSTEAMKDS KVLDYVNTVS SLQYRKLDFE EFVAAAISVL QMEALDTWEQ HARHGYEFFE KDGNRPIMIE ELASELGLSP SVPVHVVLQD
401: WIKHSDGKLS LLGFVKLLHG VSSRAIPKS

Best Arabidopsis Sequence Match ( AT1G49580.1 )
(BLAST)

001: MGGCTSKPST SSGRPNPFAP GNDYPQIDDF APDHPGKSPI PTPSAAKASP FFPFYTPSPA RHRRNKSRDV GGGGESKSLT STPLRQLRRA FHPPSPAKHI
101: RAALRRRKGK KEAALSGVTQ LTTEVPQREE EEEVGLDKRF GFSKEFHSRV ELGEEIGRGH FGYTCSAKFK KGELKGQVVA VKIIPKSKMT TAIAIEDVRR
201: EVKILQALSG HKNLVQFYDA FEDNANVYIA MELCEGGELL DRILARGGKY SENDAKPVII QILNVVAFCH FQGVVHRDLK PENFLYTSKE ENSQLKAIDF
301: GLSDFVRPDE RLNDIVGSAY YVAPEVLHRS YTTEADVWSI GVIAYILLCG SRPFWARTES GIFRAVLKAD PSFDEPPWPF LSSDAKDFVK RLLFKDPRRR
401: MSASQALMHP WIRAYNTDMN IPFDILIFRQ MKAYLRSSSL RKAALRALSK TLIKDEILYL KTQFSLLAPN KDGLITMDTI RMALASNATE AMKESRIPEF
501: LALLNGLQYR GMDFEEFCAA AINVHQHESL DCWEQSIRHA YELFDKNGNR AIVIEELASE LGVGPSIPVH SVLHDWIRHT DGKLSFFGFV KLLHGVSVRA
601: SGKTTR

Arabidopsis Description

CRK8CDPK-related kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.