CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX78797
CDY60785

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	CDX78797	AT4G17750.1	18466301
AT2G41140.1	CDY60785	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06943	Canola	cytosol	89.37	79.4
HORVU3Hr1G026700.1	Barley	plasma membrane	21.01	62.14
KRG95088	Soybean	cytosol	58.7	58.41
CDY35427	Canola	cytosol	79.95	58.38
CDY22505	Canola	cytosol	79.71	58.1
AT2G41140.1	Thale cress	cytosol	80.19	57.64
GSMUA_Achr6P16020_001	Banana	cytosol	59.66	57.58
CDX79956	Canola	cytosol	79.95	57.37
CDY23873	Canola	cytosol	79.95	57.27
HORVU7Hr1G066710.3	Barley	cytosol	22.95	55.56
HORVU6Hr1G016380.1	Barley	cytosol	22.71	54.97
CDY47375	Canola	cytosol, nucleus, plasma membrane	75.6	54.53
KRH33063	Soybean	endoplasmic reticulum, vacuole	44.69	54.25
CDX76010	Canola	cytosol	73.43	53.33
HORVU5Hr1G097280.1	Barley	extracellular, plasma membrane	12.08	53.19
KRH71707	Soybean	cytosol	72.22	51.29
GSMUA_Achr3P18430_001	Banana	cytosol	66.43	51.02
Solyc10g078390.1.1	Tomato	cytosol	70.05	50.52
HORVU1Hr1G005350.3	Barley	endoplasmic reticulum, plasma membrane	23.43	50.26
PGSC0003DMT400021598	Potato	mitochondrion	69.32	50.0
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	70.77	49.41
GSMUA_Achr10P...	Banana	cytosol	68.6	49.31
Os03t0366200-01	Rice	cytosol, plasma membrane	34.3	49.13
GSMUA_Achr6P23680_001	Banana	cytosol	67.63	48.87
Os07t0641200-01	Rice	plasma membrane	30.68	48.47
TraesCS2A01G146200.2	Wheat	cytosol	67.87	47.55
EER99788	Sorghum	cytosol	67.87	47.39
TraesCS2B01G171600.1	Wheat	cytosol	67.87	47.39
TraesCS2D01G150800.1	Wheat	cytosol	67.87	47.39
CDY69753	Canola	cytosol, plastid	59.42	46.07
EER94810	Sorghum	cytosol	65.46	45.78
Zm00001d047428_P001	Maize	cytosol	65.22	45.15
CDY65651	Canola	cytosol	63.04	44.62
CDY65016	Canola	cytosol	63.53	44.28
CDY52824	Canola	cytosol	63.04	43.94
Zm00001d022305_P001	Maize	cytosol	61.11	42.45
Zm00001d007029_P001	Maize	cytosol	60.87	42.14
CDY18568	Canola	cytosol, plastid	59.9	41.75
CDX95464	Canola	cytosol, plastid	59.42	41.55
CDX92303	Canola	cytosol	59.66	41.44
CDX99267	Canola	cytosol	59.18	41.11
CDX82311	Canola	cytosol	57.73	40.37
CDY22990	Canola	cytosol	57.73	40.24
Zm00001d029264_P004	Maize	cytosol	64.98	40.15
CDX77233	Canola	cytosol, plastid	57.25	40.1
CDY16510	Canola	cytosol, plastid	57.25	39.77
CDX87112	Canola	cytosol	26.57	37.93
CDY27530	Canola	cytosol	54.59	37.92
CDY48019	Canola	cytosol	54.59	37.92
CDX87128	Canola	cytosol	52.66	37.59
CDY19836	Canola	cytosol	52.66	37.59
CDY08129	Canola	cytosol	53.14	36.97
CDX88104	Canola	cytosol	51.93	36.88
CDY05930	Canola	cytosol	52.9	36.62
CDX80445	Canola	cytosol	51.45	36.54
HORVU2Hr1G025890.1	Barley	cytosol	66.18	34.25
CDY40640	Canola	cytosol	18.36	33.93
CDY00200	Canola	cytosol	53.14	33.69
CDY45213	Canola	plastid	43.0	33.52
CDX86978	Canola	cytosol	52.42	33.44
CDY30782	Canola	plastid	42.03	33.27
CDX72575	Canola	cytosol	42.75	32.72
CDY47052	Canola	cytosol	42.75	32.72
CDY18593	Canola	plastid	42.27	32.47
CDX81407	Canola	plastid	42.03	32.16
CDY38141	Canola	cytosol, plastid	44.2	31.88
CDY63401	Canola	cytosol, plastid	44.2	31.77
CDY29208	Canola	plastid	44.2	31.44
CDY07808	Canola	plastid	44.2	31.34
CDX92529	Canola	cytosol	38.41	29.78
CDY42266	Canola	cytosol	38.41	29.78
CDY48773	Canola	cytosol	34.06	29.75
CDY44918	Canola	cytosol	38.16	29.59
CDX97205	Canola	cytosol	38.16	29.53
CDY14001	Canola	cytosol	37.68	29.43
CDY53966	Canola	cytosol	37.68	29.32
CDX67695	Canola	cytosol	36.72	28.36
CDY33817	Canola	cytosol	36.47	28.07
CDY14793	Canola	cytosol	32.85	27.87
CDX73684	Canola	cytosol	35.27	27.65
CDY23165	Canola	cytosol	35.27	27.65
CDY06098	Canola	cytosol	35.99	27.54
CDX78044	Canola	cytosol, nucleus, plasma membrane	35.02	27.46
CDX95303	Canola	cytosol	35.02	27.46
CDY29049	Canola	cytosol	35.02	27.46
CDX90631	Canola	cytosol	35.02	27.41
CDX72022	Canola	cytosol	35.75	27.41
CDY10809	Canola	cytosol	35.27	27.19
CDY16652	Canola	cytosol	30.92	27.18
CDY06900	Canola	cytosol	34.78	27.12
CDY45391	Canola	cytosol	35.75	27.11
CDX79906	Canola	cytosol	34.78	27.07
CDX73108	Canola	cytosol	35.75	27.06
CDY34489	Canola	cytosol	35.02	26.95
CDX84782	Canola	cytosol, plastid	35.75	26.91
CDY23939	Canola	cytosol, plastid	35.75	26.91
CDX81903	Canola	cytosol, plastid	35.27	26.89
CDY21691	Canola	cytosol, plastid	35.51	26.87
CDY19084	Canola	plastid	35.99	26.33
CDY15391	Canola	plastid	35.99	25.69
CDY26714	Canola	cytosol	35.75	24.3
CDY19259	Canola	cytosol, plastid	35.75	24.14
CDY10803	Canola	cytosol	22.95	21.35
CDX94570	Canola	cytosol	30.68	17.12
CDY71104	Canola	cytosol	5.07	15.0
CDY24762	Canola	cytosol	7.49	13.72

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078J4R7	UniProt:A0A078J4R7
EnsemblPlants:CDY57585	ProteinID:CDY57585	ProteinID:CDY57585.1	InterPro:EF-hand-dom_pair	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00022392001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	PFscan:PS50011
PANTHER:PTHR24349	PANTHER:PTHR24349:SF92	InterPro:Prot_kinase_dom	SUPFAM:SSF47473	SUPFAM:SSF56112	UniParc:UPI0004EE76D3
SEG:seg	:	:	:	:	:

Description

BnaC04g56870DBnaC04g56870D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078J4R7]

Coordinates

chrLK033586:+:50119..53918

Molecular Weight (calculated)

46784.1 Da

IEP (calculated)

6.752

GRAVY (calculated)

-0.326

Length

414 amino acids

Sequence
(BLAST)

001: MGICNGKPIE QRSRQSRRQV SAETNETSEV GLNKSFGFSR HFSTHYEIDG QVGRGDLGYT CSAKGKKGSL LKGQEVAVKV IHKAKLMNAL MVEDVSREVK
101: IMSALTGHKN LVQFYDAFED DENVYIVMEL CKGGNLFEKI IERGCEYAED DAKQVMVQIL LAYCHLQGVV HRDLKPEHFL FSTKDETSPL KAVGFGFSAY
201: VKPDERLNDI VGSSLHVAPE VLHRAYGTES DMWMVGVMTY VLLSGSRPFW APTEYELFRA VLKTEPSFEE APWPSLSPDA VDFVKRLLHK DYRKRLTAAQ
301: ALCHPWLVGS HEALAKTITV QQLAYLREQF TLLEPSKDGY ISMQNFKTAI LKSSTNAMKD SRVLDYVHMR GYELFEKDGN RPIMTEELAS ELRLGPSSVP
401: MHVVLQDWIR QSDG

Best Arabidopsis Sequence Match ( AT1G49580.1 )
(BLAST)

001: MGGCTSKPST SSGRPNPFAP GNDYPQIDDF APDHPGKSPI PTPSAAKASP FFPFYTPSPA RHRRNKSRDV GGGGESKSLT STPLRQLRRA FHPPSPAKHI
101: RAALRRRKGK KEAALSGVTQ LTTEVPQREE EEEVGLDKRF GFSKEFHSRV ELGEEIGRGH FGYTCSAKFK KGELKGQVVA VKIIPKSKMT TAIAIEDVRR
201: EVKILQALSG HKNLVQFYDA FEDNANVYIA MELCEGGELL DRILARGGKY SENDAKPVII QILNVVAFCH FQGVVHRDLK PENFLYTSKE ENSQLKAIDF
301: GLSDFVRPDE RLNDIVGSAY YVAPEVLHRS YTTEADVWSI GVIAYILLCG SRPFWARTES GIFRAVLKAD PSFDEPPWPF LSSDAKDFVK RLLFKDPRRR
401: MSASQALMHP WIRAYNTDMN IPFDILIFRQ MKAYLRSSSL RKAALRALSK TLIKDEILYL KTQFSLLAPN KDGLITMDTI RMALASNATE AMKESRIPEF
501: LALLNGLQYR GMDFEEFCAA AINVHQHESL DCWEQSIRHA YELFDKNGNR AIVIEELASE LGVGPSIPVH SVLHDWIRHT DGKLSFFGFV KLLHGVSVRA
601: SGKTTR

Arabidopsis Description

CRK8CDPK-related kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.