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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • mitochondrion 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX74573
CDY01727

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G46700.1 CDX74573 AT5G37600.1 16472779
AT2G46700.1 CDY01727 AT5G37600.1 16472779
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039263.1-P Field mustard cytosol 99.66 99.66
CDY27530 Canola cytosol 98.99 98.99
AT2G46700.1 Thale cress cytosol 91.95 92.1
KRH06401 Soybean cytosol 54.87 78.8
VIT_15s0048g02840.t01 Wine grape cytosol 76.51 77.16
KRH47835 Soybean cytosol 75.34 75.84
Solyc01g096350.2.1 Tomato cytosol, nucleus 72.82 73.68
GSMUA_Achr7P05810_001 Banana cytosol 64.6 70.38
Zm00001d036416_P001 Maize plasma membrane 70.97 69.57
KXG20873 Sorghum cytosol 72.32 68.96
TraesCS7D01G380900.1 Wheat cytosol 70.97 68.01
TraesCS7A01G384500.1 Wheat cytosol 70.81 67.85
HORVU7Hr1G091360.1 Barley cytosol 70.81 67.74
Os06t0714200-01 Rice plasma membrane 70.81 67.74
TraesCS7B01G287100.1 Wheat cytosol 70.64 67.68
GSMUA_Achr9P20900_001 Banana cytosol 61.07 67.03
GSMUA_AchrUn_... Banana cytosol 60.23 66.98
GSMUA_Achr3P12500_001 Banana cytosol 60.57 66.85
Zm00001d014773_P001 Maize cytosol 60.91 65.88
GSMUA_Achr1P04170_001 Banana cytosol 59.06 64.71
GSMUA_Achr2P03380_001 Banana cytosol 58.22 64.5
CDY19836 Canola cytosol 61.74 63.45
TraesCS1A01G178400.1 Wheat cytosol 66.61 63.02
HORVU1Hr1G047350.2 Barley cytosol 66.28 63.0
CDX87128 Canola cytosol 61.07 62.76
KXG38195 Sorghum cytosol 67.45 62.71
TraesCS1B01G201900.1 Wheat cytosol 66.28 62.7
TraesCS1D01G176900.1 Wheat cytosol 66.28 62.7
CDY69753 Canola cytosol, plastid 55.2 61.61
Zm00001d032473_P001 Maize cytosol 57.21 61.44
CDY52824 Canola cytosol 60.74 60.94
CDY65016 Canola cytosol 60.74 60.94
CDX88104 Canola cytosol 59.56 60.89
CDY08129 Canola cytosol 60.57 60.67
CDY65651 Canola cytosol 59.4 60.51
CDY35427 Canola cytosol 57.55 60.49
CDX80445 Canola cytosol 59.06 60.38
CDY22505 Canola cytosol 57.21 60.04
CDY05930 Canola cytosol 60.07 59.87
CDX79956 Canola cytosol 57.21 59.1
Zm00001d013868_P001 Maize cytosol 52.52 59.06
CDY23873 Canola cytosol 56.88 58.65
CDX95464 Canola cytosol, plastid 58.05 58.45
CDY47375 Canola cytosol, nucleus, plasma membrane 56.04 58.19
CDY18568 Canola cytosol, plastid 57.89 58.08
CDX99267 Canola cytosol 58.05 58.05
CDX76010 Canola cytosol 55.37 57.89
CDX92303 Canola cytosol 57.72 57.72
CDX77233 Canola cytosol, plastid 56.88 57.36
CDX86978 Canola cytosol 62.25 57.16
CDY22990 Canola cytosol 56.88 57.07
CDX82311 Canola cytosol 56.54 56.93
CDY16510 Canola cytosol, plastid 56.88 56.88
CDY00200 Canola cytosol 62.25 56.81
Os10t0510700-00 Rice plasma membrane 67.11 54.79
CDY57585 Canola cytosol, mitochondrion 37.92 54.59
CDX87112 Canola cytosol 25.5 52.41
CDY06943 Canola cytosol 40.94 52.36
CDY45213 Canola plastid 38.09 42.75
CDY30782 Canola plastid 37.08 42.26
CDY18593 Canola plastid 38.09 42.12
CDX81407 Canola plastid 38.09 41.96
CDY38141 Canola cytosol, plastid 39.77 41.29
CDX72575 Canola cytosol 37.42 41.22
CDY63401 Canola cytosol, plastid 39.43 40.8
CDY47052 Canola cytosol 36.91 40.67
CDY29208 Canola plastid 39.43 40.38
CDY07808 Canola plastid 39.43 40.24
CDY40640 Canola cytosol 13.76 36.61
CDX92529 Canola cytosol 31.71 35.39
CDY14001 Canola cytosol 31.38 35.28
CDY42266 Canola cytosol 31.54 35.21
CDY44918 Canola cytosol 31.54 35.21
CDY48773 Canola cytosol 27.85 35.02
CDY16652 Canola cytosol 27.52 34.82
CDX73684 Canola cytosol 30.7 34.66
CDX78044 Canola cytosol, nucleus, plasma membrane 30.54 34.47
CDX95303 Canola cytosol 30.54 34.47
CDY23165 Canola cytosol 30.54 34.47
CDY29049 Canola cytosol 30.37 34.28
CDY53966 Canola cytosol 30.54 34.21
CDX90631 Canola cytosol 30.2 34.03
CDX97205 Canola cytosol 30.37 33.83
CDX67695 Canola cytosol 30.37 33.77
CDX72022 Canola cytosol 30.54 33.7
CDY33817 Canola cytosol 30.37 33.64
CDY06098 Canola cytosol 30.54 33.64
CDX81903 Canola cytosol, plastid 29.87 32.78
CDY10809 Canola cytosol 29.53 32.77
CDY21691 Canola cytosol, plastid 30.03 32.72
CDY45391 Canola cytosol 29.87 32.6
CDY34489 Canola cytosol 29.36 32.53
CDX79906 Canola cytosol 29.03 32.52
CDX73108 Canola cytosol 29.7 32.36
CDY19084 Canola plastid 30.03 31.63
CDY14793 Canola cytosol 25.84 31.56
CDX84782 Canola cytosol, plastid 29.03 31.45
CDY23939 Canola cytosol, plastid 29.03 31.45
CDY06900 Canola cytosol 27.68 31.07
CDY15391 Canola plastid 30.2 31.03
CDY71104 Canola cytosol 7.21 30.71
CDY26714 Canola cytosol 29.87 29.23
CDY19259 Canola cytosol, plastid 29.7 28.87
CDY10803 Canola cytosol 20.97 28.09
TraesCS4A01G458300.1 Wheat cytosol 62.42 22.7
CDY24762 Canola cytosol 8.22 21.68
CDX94570 Canola cytosol 26.68 21.43
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.5Gene3D:3.30.200.20GO:A0A078IFD7UniProt:A0A078IFD7
EnsemblPlants:CDY48019ProteinID:CDY48019ProteinID:CDY48019.1InterPro:EF-hand-dom_pairInterPro:EF_hand_domGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005509GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00088665001InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349
PANTHER:PTHR24349:SF103InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE9701SEG:seg:::
Description
BnaA04g26710DBnaA04g26710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFD7]
Coordinates
chrLK032749:+:129883..133275
Molecular Weight (calculated)
66444.7 Da
IEP (calculated)
9.122
GRAVY (calculated)
-0.351
Length
596 amino acids
Sequence
(BLAST)
001: MGQCYGKVNN QSKQSLGGDE ANTTTYVVSG DGSQNQPLTP LRAKNATPAR SSNPSPWPSP FPHGSSSPLP PGVSPSPART STPRRFFRRP FPPPSPAKHI
101: KASLIKRLGV KPKEGPIPEE GGVESEQALL DKSFGYGKNF GAKYELGKEV GRGHFGHTCS GRGKKGEVKD HPVAVKIISK AKMTTAIAIE DVRREVKLLK
201: SLSGHKHLIR YYDACEDANN VYIVMELCEG GELLDRILAR GGKYPEEDAK AIVVQILNVV SFCHLQGVVH RDLKPENFLF TSSREDSDLK LIDFGLSDFV
301: KPDERLNDIV GSAYYVAPEV LHRSYSLEAD IWSIGVITYI LLCGSRPFWA RTESGIFRTV LRSEPHYDDL PWPTVSPEGK EFVKRLLNKD YRKRMSAVQA
401: LTHPWLRDES RAIPLDILIF KLVKAYLHAT PLRRAALKAL AKALTENELV YLRAQFMLLG PNKDGSISLE NFKMALTQNA TDAMRESRVP EVLNMMESLA
501: YRKMYFEEFC AAAISIHQLE AVEAWDEIAA AGFEHFETEG NRVITIEELA RELNVGASAY GHLREWVRSS DGKLSFLGFT KFLHGVTLRA AHARPR
Best Arabidopsis Sequence Match ( AT2G46700.1 )
(BLAST)
001: MGQCYGKVNQ SKQNGEEEAN TTTYVVSGDG NQIQPLTPVN YGRAKNTPAR SSNPSPWPSP FPHGSASPLP SGVSPSPART STPRRFFRRP FPPPSPAKHI
101: KASLIKRLGV KPKEGPIPEE RGTEPEQSLD KSFGYGKNFG AKYELGKEVG RGHFGHTCSG RGKKGDIKDH PIAVKIISKA KMTTAIAIED VRREVKLLKS
201: LSGHKYLIKY YDACEDANNV YIVMELCDGG ELLDRILARG GKYPEDDAKA IVVQILTVVS FCHLQGVVHR DLKPENFLFT SSREDSDLKL IDFGLSDFIR
301: PDERLNDIVG SAYYVAPEVL HRSYSLEADI WSIGVITYIL LCGSRPFWAR TESGIFRTVL RTEPNYDDVP WPSCSSEGKD FVKRLLNKDY RKRMSAVQAL
401: THPWLRDDSR VIPLDILIYK LVKAYLHATP LRRAALKALA KALTENELVY LRAQFMLLGP NKDGSVSLEN FKTALMQNAT DAMRESRVPE ILHTMESLAY
501: RKMYFEEFCA AAISIHQLEA VDAWEEIATA GFQHFETEGN RVITIEELAR ELNVGASAYG HLRDWVRSSD GKLSYLGFTK FLHGVTLRAA HARPR
Arabidopsis Description
CRK3CDPK-related kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.