Factsheet for VIT_15s0048g02840.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g02200.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46700.1	VIT_01s0011g02200.t01	AT5G37600.1	16472779

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06401	Soybean	cytosol	60.91	86.75
KRH47835	Soybean	cytosol	82.23	82.09
Solyc01g096350.2.1	Tomato	cytosol, nucleus	77.16	77.42
CDY27530	Canola	cytosol	77.33	76.68
CDY48019	Canola	cytosol	77.16	76.51
Bra039263.1-P	Field mustard	cytosol	76.99	76.34
AT2G46700.1	Thale cress	cytosol	76.14	75.63
VIT_16s0098g01140.t01	Wine grape	cytosol	74.96	74.83
GSMUA_Achr7P05810_001	Banana	cytosol	69.2	74.77
GSMUA_Achr3P12500_001	Banana	cytosol	67.68	74.07
Zm00001d036416_P001	Maize	plasma membrane	76.14	74.01
Os06t0714200-01	Rice	plasma membrane	77.16	73.19
KXG20873	Sorghum	cytosol	77.33	73.12
TraesCS7D01G380900.1	Wheat	cytosol	76.65	72.83
TraesCS7B01G287100.1	Wheat	cytosol	76.65	72.83
TraesCS7A01G384500.1	Wheat	cytosol	76.65	72.83
HORVU7Hr1G091360.1	Barley	cytosol	76.65	72.71
GSMUA_Achr9P20900_001	Banana	cytosol	66.67	72.56
GSMUA_Achr1P04170_001	Banana	cytosol	66.5	72.24
GSMUA_AchrUn_...	Banana	cytosol	64.97	71.64
Zm00001d014773_P001	Maize	cytosol	65.65	70.42
GSMUA_Achr2P03380_001	Banana	cytosol	63.79	70.07
HORVU1Hr1G047350.2	Barley	cytosol	72.25	68.1
TraesCS1B01G201900.1	Wheat	cytosol	72.42	67.94
TraesCS1A01G178400.1	Wheat	cytosol	72.42	67.94
TraesCS1D01G176900.1	Wheat	cytosol	72.08	67.62
KXG38195	Sorghum	cytosol	72.76	67.08
Zm00001d032473_P001	Maize	cytosol	62.1	66.13
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	35.7	65.73
Zm00001d013868_P001	Maize	cytosol	57.19	63.77
VIT_03s0063g00940.t01	Wine grape	cytosol	62.44	63.18
Os10t0510700-00	Rice	plasma membrane	72.59	58.77
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	58.88	58.68
VIT_04s0023g03420.t01	Wine grape	plastid	41.29	43.73
VIT_06s0004g02300.t01	Wine grape	cytosol	32.66	37.26
VIT_08s0007g08300.t01	Wine grape	cytosol	31.98	35.93
VIT_08s0105g00390.t01	Wine grape	cytosol	31.81	35.67
VIT_17s0000g05520.t01	Wine grape	cytosol	25.89	35.5
VIT_05s0102g00170.t01	Wine grape	cytosol	30.8	32.85
VIT_00s0577g00010.t01	Wine grape	plasma membrane	27.92	30.56
TraesCS4A01G458300.1	Wheat	cytosol	66.16	23.86

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100250518	wikigene:100250518	MapMan:18.4.5.5	Gene3D:3.30.200.20
ProteinID:CBI38688	ProteinID:CBI38688.3	UniProt:D7U806	InterPro:EF-hand-dom_pair	EMBL:FN596739	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004683	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738
GO:GO:0009931	GO:GO:0009987	GO:GO:0010150	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	GO:GO:0071215	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100250518	wikigene:LOC100250518	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC68066	TIGR:TC70490	UniParc:UPI00015CA7DC
ArrayExpress:VIT_15s0048g02840	EnsemblPlantsGene:VIT_15s0048g02840	EnsemblPlants:VIT_15s0048g02840.t01	unigene:Vvi.12709	RefSeq:XP_002266654	RefSeq:XP_002266654.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr15:+:16956942..16963951

Molecular Weight (calculated)

65630.6 Da

IEP (calculated)

8.908

GRAVY (calculated)

-0.314

Length

591 amino acids

Sequence
(BLAST)

001: MGQCYGKPVV NGNGKGGVVE EYPQSPLPSV GNGAASVQSV KTPARSSSTS PWRSPFPHGS ASSPLPAGVA PSPARSSTPR RFFRRPFPPP SPAKHIKASL
101: AKRLGPAKPK EGPIPEEGTE PEQLLDKSFG YGKNFGAKYE LGKEVGRGHF GHTCSARGKK GELRDQPLAV KIISKAKMTT AIAIEDVRRE VKILKALSGH
201: AHLVKFYDAC EDANNVYIIM ELCEGGELLD RILSRGGRYT EEDAKAIVVQ ILSVVAFCHL QGVVHRDLKP ENFLFTSRSE DADMKLIDFG LSDFIRPDER
301: LNDIVGSAYY VAPEVLHRSY YLEADIWSVG VITYILLCGS RPFWARTESG IFRAVLRADP NFDDLPWPTV SAEAKDFVKR LLNKDYRKRM TAVQALTHPW
401: LRDGSHPIPL DILIYKLVKS YLLATPFKRA ALKALSKALT EDELVYLRSQ FKLLEPGRDG SVSLDSFKMA LARNATDAMK ESRVPDILNA LEPLCYRRMD
501: FEEFCAAAIS THQLEALEGW EQIASTAFEI FEQEGNRVIS VEELARELNL GPSAYSVLKE WIRNSDGKLS LLGYTKFLHG VTHRSSNTRQ H

Best Arabidopsis Sequence Match ( AT2G46700.1 )
(BLAST)

001: MGQCYGKVNQ SKQNGEEEAN TTTYVVSGDG NQIQPLTPVN YGRAKNTPAR SSNPSPWPSP FPHGSASPLP SGVSPSPART STPRRFFRRP FPPPSPAKHI
101: KASLIKRLGV KPKEGPIPEE RGTEPEQSLD KSFGYGKNFG AKYELGKEVG RGHFGHTCSG RGKKGDIKDH PIAVKIISKA KMTTAIAIED VRREVKLLKS
201: LSGHKYLIKY YDACEDANNV YIVMELCDGG ELLDRILARG GKYPEDDAKA IVVQILTVVS FCHLQGVVHR DLKPENFLFT SSREDSDLKL IDFGLSDFIR
301: PDERLNDIVG SAYYVAPEVL HRSYSLEADI WSIGVITYIL LCGSRPFWAR TESGIFRTVL RTEPNYDDVP WPSCSSEGKD FVKRLLNKDY RKRMSAVQAL
401: THPWLRDDSR VIPLDILIYK LVKAYLHATP LRRAALKALA KALTENELVY LRAQFMLLGP NKDGSVSLEN FKTALMQNAT DAMRESRVPE ILHTMESLAY
501: RKMYFEEFCA AAISIHQLEA VDAWEEIATA GFQHFETEGN RVITIEELAR ELNVGASAYG HLRDWVRSSD GKLSYLGFTK FLHGVTLRAA HARPR

Arabidopsis Description

CRK3CDPK-related kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.