Factsheet for VIT_03s0063g00940.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_02s0012g01810.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01
VIT_17s0000g07350.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G49580.1	VIT_17s0000g07350.t01	AT5G61010.1	21798944
AT3G19100.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT3G19100.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT3G19100.1	VIT_02s0012g01810.t01	AT4G17750.1	18466301
AT3G19100.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT3G19100.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	50.68	92.21
Os07t0619800-02	Rice	cytosol, plasma membrane	64.9	83.66
KRH50248	Soybean	cytosol	83.56	81.61
KRH71170	Soybean	cytosol	83.39	81.44
TraesCS2D01G173100.1	Wheat	cytosol	65.75	80.67
Solyc01g108400.2.1	Tomato	cytosol	80.31	79.76
PGSC0003DMT400066365	Potato	cytosol	79.62	79.08
GSMUA_Achr1P21380_001	Banana	cytosol	82.02	78.91
Zm00001d000221_P001	Maize	cytosol	14.9	76.32
GSMUA_Achr2P07660_001	Banana	cytosol	78.94	75.95
Zm00001d006885_P002	Maize	cytosol	71.58	72.82
EER99712	Sorghum	cytosol	74.66	72.55
TraesCS2B01G191800.1	Wheat	cytosol	74.32	71.85
TraesCS2A01G165800.1	Wheat	cytosol, plastid	74.14	71.81
CDY18568	Canola	cytosol, plastid	72.43	71.21
AT3G19100.1	Thale cress	cytosol	72.95	71.12
CDX95464	Canola	cytosol, plastid	72.09	71.11
Bra037539.1-P	Field mustard	cytosol, plastid	72.26	71.04
Bra022388.1-P	Field mustard	cytosol	71.92	70.47
CDX99267	Canola	cytosol	71.92	70.47
CDX92303	Canola	cytosol	71.92	70.47
CDX82311	Canola	cytosol	71.06	70.1
AT1G49580.1	Thale cress	cytosol	72.6	69.97
CDX77233	Canola	cytosol, plastid	70.38	69.54
CDY22990	Canola	cytosol	70.72	69.53
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	70.55	69.48
CDY16510	Canola	cytosol, plastid	70.55	69.13
Bra014201.1-P	Field mustard	cytosol, plastid	70.38	67.05
Zm00001d022166_P001	Maize	cytosol	65.24	66.49
VIT_15s0048g02840.t01	Wine grape	cytosol	63.18	62.44
Bra001734.1-P	Field mustard	cytosol, plastid	69.18	61.87
VIT_16s0098g01140.t01	Wine grape	cytosol	60.96	60.14
HORVU2Hr1G030520.1	Barley	cytosol	43.66	51.52
VIT_04s0023g03420.t01	Wine grape	plastid	44.18	46.24
VIT_00s0577g00010.t01	Wine grape	plasma membrane	36.13	39.07
VIT_08s0007g08300.t01	Wine grape	cytosol	34.59	38.4
VIT_06s0004g02300.t01	Wine grape	cytosol	33.73	38.03
VIT_17s0000g05520.t01	Wine grape	cytosol	27.23	36.89
VIT_08s0105g00390.t01	Wine grape	cytosol	32.36	35.86
VIT_05s0102g00170.t01	Wine grape	cytosol	32.71	34.48

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100241846	wikigene:100241846	MapMan:18.4.5.5	Gene3D:3.30.200.20
EMBL:AM427988	ProteinID:CAN82235	ProteinID:CAN82235.1	ProteinID:CBI32452	ProteinID:CBI32452.3	UniProt:D7TPM9
InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	EMBL:FN596006	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777
InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100241846	wikigene:LOC100241846	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF115
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC62732	UniParc:UPI00015C8AD8	ArrayExpress:VIT_03s0063g00940	EnsemblPlantsGene:VIT_03s0063g00940	EnsemblPlants:VIT_03s0063g00940.t01	unigene:Vvi.16040
unigene:Vvi.21070	RefSeq:XP_002281956	RefSeq:XP_002281956.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:-:4368190..4388439

Molecular Weight (calculated)

65203.2 Da

IEP (calculated)

9.129

GRAVY (calculated)

-0.313

Length

584 amino acids

Sequence
(BLAST)

001: MGICASKPPK QNPYAPESLE PSATPGAVSK DEAEGPGKRS PFFPFYSPSP AHYLFSKKSP AVRSASSTPR RFFKRPFPPP SPAKHIKAVL ARRQGKKAAA
101: IPEGEGEEEE AAAGGLDKSF GFSKQFTSKY EVGEEVGRGH FGYTCSARFK KGERKGQQVA VKVIPKAKMT TAIAIEDVRR EVKILRALTG HKNLVQFYDA
201: FEDHDNVYIV MELCEGGELL DRILSRGGKY SEDDARAVMV QILNVVSFFH LQGVVHRDLK PENFLFTSKD ENSELKAIDF GLSDFVKPDE RLNDIVGSAY
301: YVSPEVLHRS YSTEADVWSI GVIAYILLCG SRPFWARTES GIFRAVLKAD PSFDEVPWPS LSSEAKDFVK CLLNKDPRKR ITAAQALSHP WIRGYNGVKV
401: PLDILIFKLM KAYMRSSSLR KAALRALSKT LTVDELLYLK EQFAHLEPNK NGTITLENIR TALMKNATDA MKESRIPDFL ASLNALQYRR MDFEEFCAAA
501: LSVHQLEALD RWEQHARCAY ELFDKDGNRA IMIEELASEL GLGPSVPVHA VLHDWIRHTD GKLSFLGFVK LLHGVSSRAL AKAQ

Best Arabidopsis Sequence Match ( AT3G50530.1 )
(BLAST)

001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H

Arabidopsis Description

CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.