CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER93074
EES01631
EES09201
EES16322
KXG33434
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G49580.1	KXG33434	AT5G61010.1	21798944
AT3G19100.1	EES01631	AT2G41090.1	17360592
AT3G19100.1	EES09201	AT2G41090.1	17360592
AT3G19100.1	EES16322	AT2G41090.1	17360592
AT3G19100.1	OQU78227	AT2G41090.1	17360592
AT3G19100.1	EER93074	AT4G17750.1	18466301
AT3G19100.1	EES01631	AT5G21274.1	17360592
AT3G19100.1	EES09201	AT5G21274.1	17360592
AT3G19100.1	EES16322	AT5G21274.1	17360592
AT3G19100.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006885_P002	Maize	cytosol	92.68	97.04
Os07t0619800-02	Rice	cytosol, plasma membrane	72.55	96.25
TraesCS2D01G173100.1	Wheat	cytosol	75.21	94.96
Zm00001d000221_P001	Maize	cytosol	17.64	92.98
TraesCS2B01G191800.1	Wheat	cytosol	91.85	91.39
TraesCS2A01G165800.1	Wheat	cytosol, plastid	91.18	90.88
Zm00001d022166_P001	Maize	cytosol	81.03	84.99
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	44.09	82.55
GSMUA_Achr1P21380_001	Banana	cytosol	76.54	75.78
VIT_03s0063g00940.t01	Wine grape	cytosol	72.55	74.66
GSMUA_Achr2P07660_001	Banana	cytosol	75.04	74.3
KRH28502	Soybean	cytosol, mitochondrion	70.05	74.12
CDY69753	Canola	cytosol, plastid	65.72	73.97
KRH57894	Soybean	cytosol, plastid	70.22	73.01
Solyc01g108400.2.1	Tomato	cytosol	71.21	72.79
KRH50248	Soybean	cytosol	72.38	72.74
CDY65651	Canola	cytosol	70.55	72.48
Solyc02g065070.2.1	Tomato	cytosol	71.21	72.42
KRH71170	Soybean	cytosol	72.05	72.41
PGSC0003DMT400001990	Potato	cytosol	71.05	72.37
CDY52824	Canola	cytosol	71.38	72.22
Bra036089.1-P	Field mustard	cytosol	71.38	72.22
PGSC0003DMT400066365	Potato	cytosol	70.55	72.11
CDY65016	Canola	cytosol	71.05	71.89
KRH76957	Soybean	plastid	71.38	71.03
Solyc02g090510.2.1	Tomato	nucleus	71.55	70.84
EER99788	Sorghum	cytosol	67.55	68.47
AT3G50530.2	Thale cress	plastid	71.55	68.04
PGSC0003DMT400026076	Potato	cytosol	71.88	67.39
CDX77233	Canola	cytosol, plastid	66.22	67.34
AT1G49580.1	Thale cress	cytosol	67.39	66.83
CDX95464	Canola	cytosol, plastid	65.72	66.72
CDY16510	Canola	cytosol, plastid	65.89	66.44
Bra037539.1-P	Field mustard	cytosol, plastid	65.56	66.33
CDY18568	Canola	cytosol, plastid	65.56	66.33
AT3G19100.1	Thale cress	cytosol	66.06	66.28
CDX99267	Canola	cytosol	65.72	66.28
CDX92303	Canola	cytosol	65.39	65.94
Bra022388.1-P	Field mustard	cytosol	65.39	65.94
CDX82311	Canola	cytosol	64.73	65.71
CDY22990	Canola	cytosol	64.06	64.81
Bra014201.1-P	Field mustard	cytosol, plastid	65.72	64.44
EER94810	Sorghum	cytosol	63.23	64.19
KRH33065	Soybean	cytosol	29.62	60.75
HORVU2Hr1G030520.1	Barley	cytosol	49.75	60.4
KXG20873	Sorghum	cytosol	62.06	59.68
Bra001734.1-P	Field mustard	cytosol, plastid	63.23	58.19
KXG38195	Sorghum	cytosol	60.07	56.32
EER98402	Sorghum	cytosol	39.43	46.11
KXG29360	Sorghum	plastid	39.1	44.76
EER93237	Sorghum	cytosol	32.28	36.47
EER99568	Sorghum	cytosol	32.61	36.1
EES19672	Sorghum	cytosol	32.61	36.1
VIT_00s0577g00010.t01	Wine grape	plasma membrane	32.11	35.74
EES01704	Sorghum	cytosol	32.11	35.41
EER93646	Sorghum	plastid	33.28	34.13
EES15873	Sorghum	mitochondrion	31.11	32.86
EES04099	Sorghum	cytosol	29.12	31.42
OQU89769	Sorghum	mitochondrion	16.64	30.77
OQU80791	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	14.64	29.73

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	EntrezGene:8060692	UniProt:C5X2F5
EnsemblPlants:EER99712	ProteinID:EER99712	ProteinID:EER99712.1	InterPro:EF-hand-dom_pair	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24349	PANTHER:PTHR24349:SF115	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G377300
SUPFAM:SSF47473	SUPFAM:SSF56112	unigene:Sbi.12791	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A83E20	RefSeq:XP_002463191.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:73419755..73426039

Molecular Weight (calculated)

66147.4 Da

IEP (calculated)

9.205

GRAVY (calculated)

-0.275

Length

601 amino acids

Sequence
(BLAST)

001: MGGCHAKPLT HDADGSPPHA APATPPPGNA TPATPATGKK HWAVSPFFPF STPSPSPAHH LFGGTAASPR KSPAPAGSAP TTPARRLLRL PFPPPSPAKH
101: IRAALARRHG PSRPSIPEEG GGEGEGGGGG RGLDKGFGFN KGFAAKYDLG DEVGRGHFGY TCAATVKKGA RKGESVAIKV IPKAKMTTSI AIEDVRREVK
201: ILKALAGNKN LVQFYDAYED NDNVYIVMEL CEGGELLDRI LSRGGKYSED DAKAVLVQIL NVVAFCHIQG VVHRDLKPEN FLFTSKEENS NLKAIDFGLS
301: DFVKPDERLN DIVGSAYYVA PEVLHRCYST EADVWSIGVI AYILLCGSRP FWARTESGIF RSVLKADPSY NEAPWPSLTP EAMDFVKRLL CKDPRRRMTA
401: AQALSHPWIR NYNDIKLPLD ILIFRLIKSY IRSSSLRKAA LRALSKTLTV DELFYLKAQF SLLEPDRNGC ITLDNIRMAL TREATDAMKE SRVQEILVSL
501: SALQYRRMDF QEFCAAAVSV HQLEALDRWE QHARSAYEHF EKEGNRAIVI DELASELGLS PSVPLHVVLQ DWIRHTDGKL SFLGFVKLLH GMSSRSLSKM
601: R

Best Arabidopsis Sequence Match ( AT3G50530.1 )
(BLAST)

001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H

Arabidopsis Description

CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.