Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400066365 Potato cytosol 98.3 98.3
Solyc06g008830.1.1 Tomato cytosol 14.46 83.33
Os07t0619800-02 Rice cytosol, plasma membrane 62.07 80.57
VIT_03s0063g00940.t01 Wine grape cytosol 79.76 80.31
Solyc08g062990.1.1 Tomato cytosol 19.39 80.28
KRH71170 Soybean cytosol 80.27 78.93
KRH50248 Soybean cytosol 79.93 78.6
TraesCS2D01G173100.1 Wheat cytosol 63.44 78.36
Solyc10g050080.1.1 Tomato cytosol 18.88 78.17
Solyc04g049100.1.1 Tomato cytosol 18.71 77.46
Solyc02g065070.2.1 Tomato cytosol 77.21 76.82
Solyc05g041110.1.1 Tomato nucleus 14.63 76.79
GSMUA_Achr1P21380_001 Banana cytosol 77.89 75.45
Solyc02g090510.2.1 Tomato nucleus 76.53 74.14
Zm00001d000221_P001 Maize cytosol 14.29 73.68
GSMUA_Achr2P07660_001 Banana cytosol 75.0 72.65
Solyc10g061860.1.1 Tomato cytosol 17.18 72.14
EER99712 Sorghum cytosol 72.79 71.21
Zm00001d006885_P002 Maize cytosol 69.39 71.08
Solyc10g078390.1.1 Tomato cytosol 68.88 70.56
TraesCS2A01G165800.1 Wheat cytosol, plastid 72.11 70.32
TraesCS2B01G191800.1 Wheat cytosol 72.11 70.2
CDX92303 Canola cytosol 70.75 69.8
Bra022388.1-P Field mustard cytosol 70.75 69.8
CDX95464 Canola cytosol, plastid 70.24 69.76
CDX99267 Canola cytosol 70.58 69.63
AT3G19100.1 Thale cress cytosol 70.92 69.62
Bra037539.1-P Field mustard cytosol, plastid 70.24 69.53
CDY18568 Canola cytosol, plastid 70.24 69.53
AT1G49580.1 Thale cress cytosol 71.09 68.98
CDX82311 Canola cytosol 69.05 68.58
CDX77233 Canola cytosol, plastid 68.54 68.19
CDY22990 Canola cytosol 68.88 68.18
CDY16510 Canola cytosol, plastid 69.05 68.12
Bra014201.1-P Field mustard cytosol, plastid 68.88 66.07
Zm00001d022166_P001 Maize cytosol 63.78 65.44
Solyc03g082500.2.1 Tomato nucleus 61.56 60.54
Bra001734.1-P Field mustard cytosol, plastid 67.18 60.49
Solyc01g096350.2.1 Tomato cytosol, nucleus 59.35 59.25
HORVU2Hr1G030520.1 Barley cytosol 42.01 49.9
Solyc02g083850.2.1 Tomato plastid 43.71 45.09
Solyc03g033540.2.1 Tomato extracellular 43.03 44.78
Solyc12g005030.1.1 Tomato cytosol 23.98 39.17
Solyc10g079130.1.1 Tomato nucleus 34.52 38.67
Solyc01g008440.2.1 Tomato cytosol 34.18 37.71
Solyc11g065660.1.1 Tomato cytosol 33.84 37.34
Solyc03g113390.2.1 Tomato cytosol 33.5 36.62
Solyc06g073350.2.1 Tomato plastid 32.65 35.82
Solyc09g005550.2.1 Tomato cytosol 31.97 35.54
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4MapMan:18.4.5.5Gene3D:3.30.200.20InterPro:EF-hand-dom_pair
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488
GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009738GO:GO:0009931
GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0018105GO:GO:0019538
GO:GO:0035556GO:GO:0046777InterPro:IPR000719UniProt:K4B355InterPro:Kinase-like_dom_sfPFAM:PF00069
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24349PANTHER:PTHR24349:SF115InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc01g108400.2
EnsemblPlants:Solyc01g108400.2.1UniParc:UPI000276824FSEG:seg:::
Description
No Description!
Coordinates
chr1:+:95736415..95742203
Molecular Weight (calculated)
65840.3 Da
IEP (calculated)
9.253
GRAVY (calculated)
-0.326
Length
588 amino acids
Sequence
(BLAST)
001: MGACTSKPPR PNPYSPQEIL PPPETPNVAE TQKENEAKKS PFFPFYSPSP ARFFLSKKSP ARHSSASKSA NSTPARLFKR PFPPPSPAKH IKALLLRRHG
101: SVKPNAASIP EGEETEGANL DKSFGFSKQF VSKYEIGEEV GRGHFGYTCS AIVKKGELKG QKVAVKVIPK AKMTTAISIE DVRREVKILR ALTGHNNLIQ
201: FYDAFEDRDN VYIVMELCQG GELLDRILAR GGKYSEEDAK DVMVQILNVV AFCHLQGVVH RDLKPENFLF LSKDESSPLK AIDFGLSDFV RPDEKLNDIV
301: GSAYYVAPEV LHRSYGIEAD VWSIGVIAYI LLCGSRPFWA RTESGIFRAV LKADPTYDEA PWPTLTSEAN DFVKRLLNKD PRKRMSAAQA LCHPWMRNHS
401: GAKLPLDILI FRLMKAYMRS SSLRKAALRA LSKTLTADEL FYLKEQFALL EPDKNGNIKL ENIRSALMKY GTDAMKESRI PDFLASLNAL QYRKMDFEEF
501: CAAALSVHQL EALERWEQHA RCAYEIFDKD GNRAIVIEEL ASELGLGPSI PVHAVLNDWI RHTDGKLSFL GFVKLLHGPS TRGLAKAQ
Best Arabidopsis Sequence Match ( AT3G50530.1 )
(BLAST)
001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H
Arabidopsis Description
CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.