Factsheet for Solyc01g096350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc05g051250.2.1
Solyc11g011380.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46700.1	Solyc05g051250.2.1	AT5G37600.1	16472779
AT2G46700.1	Solyc11g011380.1.1	AT5G37600.1	16472779

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06401	Soybean	cytosol	56.03	79.52
VIT_15s0048g02840.t01	Wine grape	cytosol	77.42	77.16
KRH47835	Soybean	cytosol	76.23	75.84
Solyc06g008830.1.1	Tomato	cytosol	12.9	74.51
AT2G46700.1	Thale cress	cytosol	73.85	73.11
CDY27530	Canola	cytosol	73.85	72.99
Bra039263.1-P	Field mustard	cytosol	73.68	72.82
CDY48019	Canola	cytosol	73.68	72.82
Solyc05g041110.1.1	Tomato	nucleus	13.58	71.43
GSMUA_Achr7P05810_001	Banana	cytosol	66.21	71.3
Solyc08g062990.1.1	Tomato	cytosol	17.15	71.13
GSMUA_Achr9P20900_001	Banana	cytosol	64.69	70.17
Zm00001d036416_P001	Maize	plasma membrane	72.33	70.07
KXG20873	Sorghum	cytosol	73.68	69.44
TraesCS7D01G380900.1	Wheat	cytosol	73.01	69.13
Solyc10g050080.1.1	Tomato	cytosol	16.64	69.01
TraesCS7B01G287100.1	Wheat	cytosol	72.84	68.97
TraesCS7A01G384500.1	Wheat	cytosol	72.84	68.97
HORVU7Hr1G091360.1	Barley	cytosol	72.84	68.86
GSMUA_Achr3P12500_001	Banana	cytosol	62.99	68.7
Os06t0714200-01	Rice	plasma membrane	72.5	68.54
GSMUA_Achr2P03380_001	Banana	cytosol	62.48	68.4
Solyc03g082500.2.1	Tomato	nucleus	69.44	68.39
GSMUA_Achr1P04170_001	Banana	cytosol	62.82	68.01
Solyc04g049100.1.1	Tomato	cytosol	16.3	67.61
GSMUA_AchrUn_...	Banana	cytosol	61.12	67.16
Zm00001d014773_P001	Maize	cytosol	61.46	65.7
TraesCS1A01G178400.1	Wheat	cytosol	68.76	64.29
TraesCS1D01G176900.1	Wheat	cytosol	68.59	64.13
TraesCS1B01G201900.1	Wheat	cytosol	68.59	64.13
HORVU1Hr1G047350.2	Barley	cytosol	68.25	64.11
KXG38195	Sorghum	cytosol	69.27	63.65
Solyc10g061860.1.1	Tomato	cytosol	14.77	62.14
Zm00001d032473_P001	Maize	cytosol	58.4	61.98
Solyc02g065070.2.1	Tomato	cytosol	60.61	60.41
Solyc10g078390.1.1	Tomato	cytosol	58.06	59.58
Solyc01g108400.2.1	Tomato	cytosol	59.25	59.35
Zm00001d013868_P001	Maize	cytosol	53.14	59.06
Solyc02g090510.2.1	Tomato	nucleus	60.44	58.65
Os10t0510700-00	Rice	plasma membrane	69.44	56.03
Solyc02g083850.2.1	Tomato	plastid	40.07	41.4
Solyc03g033540.2.1	Tomato	extracellular	39.39	41.06
Solyc12g005030.1.1	Tomato	cytosol	24.11	39.44
Solyc10g079130.1.1	Tomato	nucleus	32.77	36.76
Solyc01g008440.2.1	Tomato	cytosol	32.09	35.46
Solyc11g065660.1.1	Tomato	cytosol	32.09	35.46
Solyc03g113390.2.1	Tomato	cytosol	31.58	34.57
Solyc09g005550.2.1	Tomato	cytosol	30.9	34.4
Solyc06g073350.2.1	Tomato	plastid	30.22	33.21
TraesCS4A01G458300.1	Wheat	cytosol	63.5	22.82

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004683	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738
GO:GO:0009931	GO:GO:0009987	GO:GO:0010150	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	GO:GO:0071215	InterPro:IPR000719
UniProt:K4B023	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24349	PANTHER:PTHR24349:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc01g096350.2	EnsemblPlants:Solyc01g096350.2.1	UniParc:UPI00027678A3	SEG:seg

Description

CDPK-related kinase 3 [Source:Projected from Arabidopsis thaliana (AT2G46700) UniProtKB/Swiss-Prot;Acc:Q9ZUZ2]

Coordinates

chr1:-:87417371..87427931

Molecular Weight (calculated)

66103.1 Da

IEP (calculated)

7.926

GRAVY (calculated)

-0.369

Length

589 amino acids

Sequence
(BLAST)

001: MGQCYGKTVP TVRDADGPIT DVIGDSDHPL QQTPVSSNNL PSVKNTPARS SANSPWPSPY PHGVVGVTPS PARSTPRRFF KRPFPPPSPA KHIKASLAKR
101: FGHAKPPAEG PIPEDDTPEP EQSLDKNFGY NKNFGAKFEL GKEIGRGHFG HTCHAVGKKG ELKDLPVAVK IISKTKMTTA VSIEDVRREV KILRALSGHK
201: HLVKFHDGCE DANNVYIAME LCEGGELLDR ILSRGGKYSE DDAKLIIVQI LNVVAFCHLQ GVVHRDLKPE NFLFTSRDED ADMKLIDFGL SDFIRPDERL
301: NDIVGSAYYV APEVLHRSYS LEADIWSIGV ITYILLCGSR PFWARTESGI FRSVLRSDPN FEDLPWPSVS PEAKDFVKRL LNKDYRKRMT AAQALTHPWL
401: RSESHPIPLD IFVYKLVKSY LHATPLKRAA LKALSKALTE DELVYLRAQF MLLEPSQDGR VSIENFRLAL LGNATEAMRE SRVHDILNAM TALSYKKLDF
501: EEFCAAAIST YQLEALEEWE QIAAVAFQHF EQEGNRHVSV EELARELNVG PTAHSILRDW IRNDGKLNML GYTKFLHGVT LRSTPVRRH

Best Arabidopsis Sequence Match ( AT2G46700.1 )
(BLAST)

001: MGQCYGKVNQ SKQNGEEEAN TTTYVVSGDG NQIQPLTPVN YGRAKNTPAR SSNPSPWPSP FPHGSASPLP SGVSPSPART STPRRFFRRP FPPPSPAKHI
101: KASLIKRLGV KPKEGPIPEE RGTEPEQSLD KSFGYGKNFG AKYELGKEVG RGHFGHTCSG RGKKGDIKDH PIAVKIISKA KMTTAIAIED VRREVKLLKS
201: LSGHKYLIKY YDACEDANNV YIVMELCDGG ELLDRILARG GKYPEDDAKA IVVQILTVVS FCHLQGVVHR DLKPENFLFT SSREDSDLKL IDFGLSDFIR
301: PDERLNDIVG SAYYVAPEVL HRSYSLEADI WSIGVITYIL LCGSRPFWAR TESGIFRTVL RTEPNYDDVP WPSCSSEGKD FVKRLLNKDY RKRMSAVQAL
401: THPWLRDDSR VIPLDILIYK LVKAYLHATP LRRAALKALA KALTENELVY LRAQFMLLGP NKDGSVSLEN FKTALMQNAT DAMRESRVPE ILHTMESLAY
501: RKMYFEEFCA AAISIHQLEA VDAWEEIATA GFQHFETEGN RVITIEELAR ELNVGASAYG HLRDWVRSSD GKLSYLGFTK FLHGVTLRAA HARPR

Arabidopsis Description

CRK3CDPK-related kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.